RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 TFRCP02786 760 aaKnown RBP11.71□□□□□ -0.53
CTSA-215ENST00000607187 CYP2C19P33261 490 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 KCTD2Q14681 263 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 CCDC96Q2M329 555 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 ZNF792Q3KQV3 632 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 ENAHQ8N8S7 591 aaPredicted RBP11.71□□□□□ -0.53
CTSA-215ENST00000607187 CHST13Q8NET6 341 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 MAML3Q96JK9 1138 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 ESYT1Q9BSJ8 1104 aa11.71□□□□□ -0.53
CTSA-215ENST00000607187 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
CTSA-215ENST00000607187 RBM8AQ9Y5S9 174 aaKnown RBP11.71□□□□□ -0.53
CTSA-215ENST00000607187 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 TNKSO95271 1327 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 FRMPD2Q68DX3 1309 aaPredicted RBP11.7□□□□□ -0.54
CTSA-215ENST00000607187 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 FARP2O94887 1054 aaPredicted RBP11.7□□□□□ -0.54
CTSA-215ENST00000607187 PGK2P07205 417 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 TRDNQ13061 729 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 SYDE2Q5VT97 1194 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 LHX8Q68G74 356 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 CYB5R4Q7L1T6 521 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 PNMA1Q8ND90 353 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 UBAC1Q9BSL1 405 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
CTSA-215ENST00000607187 RANBP17Q9H2T7 1088 aaKnown RBP11.7□□□□□ -0.54
CTSA-215ENST00000607187 FBXO40Q9UH90 709 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 OGDHLQ9ULD0 1010 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 TAF6LQ9Y6J9 622 aa11.7□□□□□ -0.54
CTSA-215ENST00000607187 RANBP2P49792 3224 aaKnown RBP11.7□□□□□ -0.54
CTSA-215ENST00000607187 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
CTSA-215ENST00000607187 LCTP09848 1927 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 E7EWF7 191 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 CYBAP13498 195 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 SLC16A2P36021 539 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 SNAP25P60880 206 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 SEC23AQ15436 765 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 TKFCQ3LXA3 575 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 TRPV1Q8NER1 839 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 KAT14Q9H8E8 782 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
CTSA-215ENST00000607187 MSCO60682 206 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 ICAM1P05362 532 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 GPATCH4Q5T3I0 446 aaKnown RBP11.68□□□□□ -0.54
CTSA-215ENST00000607187 IFIT1BQ5T764 474 aaKnown RBP11.68□□□□□ -0.54
CTSA-215ENST00000607187 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 CCDC174Q6PII3 467 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
CTSA-215ENST00000607187 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 DDX11Q96FC9 970 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 TINF2Q9BSI4 451 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 ACAD9Q9H845 621 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 HOMER2Q9NSB8 354 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 RNF146Q9NTX7 359 aa11.68□□□□□ -0.54
CTSA-215ENST00000607187 DDX20Q9UHI6 824 aaKnown RBP11.68□□□□□ -0.54
CTSA-215ENST00000607187 EVI5O60447 810 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
CTSA-215ENST00000607187 GOLGA8HP0CJ92 632 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 ALAS1P13196 640 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 CNGA1P29973 690 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 CLCN1P35523 988 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 NECTIN1Q15223 517 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 ASPRV1Q53RT3 343 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 PRAMEF19Q5SWL8 479 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
CTSA-215ENST00000607187 MAMDC4Q6UXC1 1216 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
CTSA-215ENST00000607187 DIS3LQ8TF46 1054 aaKnown RBP11.67□□□□□ -0.54
CTSA-215ENST00000607187 PAWRQ96IZ0 340 aaKnown RBP11.67□□□□□ -0.54
CTSA-215ENST00000607187 A1CFQ9NQ94 594 aaKnown RBP11.67□□□□□ -0.54
CTSA-215ENST00000607187 NRBP1Q9UHY1 535 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 CCPG1Q9ULG6 757 aa11.67□□□□□ -0.54
CTSA-215ENST00000607187 PFASO15067 1338 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 C19orf67A6NJJ6 358 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 SEPT4O43236 478 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 CDC45O75419 566 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 PARP1P09874 1014 aaKnown RBP11.66□□□□□ -0.54
CTSA-215ENST00000607187 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
CTSA-215ENST00000607187 MUM1L1Q5H9M0 696 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 NECAB2Q7Z6G3 386 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 MB21D2Q8IYB1 491 aaPredicted RBP11.66□□□□□ -0.54
CTSA-215ENST00000607187 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 FGD4Q96M96 766 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 HTATIP2Q9BUP3 242 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 ANO2Q9NQ90 1003 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 PNMA2Q9UL42 364 aa11.66□□□□□ -0.54
CTSA-215ENST00000607187 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
CTSA-215ENST00000607187 SLC27A2O14975 620 aa11.65□□□□□ -0.54
CTSA-215ENST00000607187 SNAI1O95863 264 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms