RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ZNF444Q8N0Y2 327 aaPredicted RBP17.88■□□□□ 0.45
SSBP4-214ENST00000607020 NECAB3Q96P71 396 aaPredicted RBP17.88■□□□□ 0.45
SSBP4-214ENST00000607020 PLA2G6O60733 806 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 SUPT20HL2P0C7V6 817 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 BMP3P12645 472 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 MYOGP15173 224 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 ATP2A2P16615 1042 aaKnown RBP17.87■□□□□ 0.45
SSBP4-214ENST00000607020 TFF2Q03403 129 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 TAPT1Q6NXT6 567 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 CHURC1Q8WUH1 139 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 CEP95Q96GE4 821 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 ALDH8A1Q9H2A2 487 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-214ENST00000607020 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 COG5Q9UP83 839 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 MTCH2Q9Y6C9 303 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 ZNF536O15090 1300 aa17.87■□□□□ 0.45
SSBP4-214ENST00000607020 MYO9BQ13459 2157 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 MINDY4BA8MYZ0 360 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 MS4A1P11836 297 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 SLFN13Q68D06 897 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 MORC4Q8TE76 937 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 STAG1Q8WVM7 1258 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 GMCL1Q96IK5 515 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 HOMER2Q9NSB8 354 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 COG6Q9Y2V7 657 aa17.86■□□□□ 0.45
SSBP4-214ENST00000607020 COL11A1P12107 1806 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-214ENST00000607020 NEDD1Q8NHV4 660 aa17.85■□□□□ 0.45
SSBP4-214ENST00000607020 PHOSPHO2Q8TCD6 241 aa17.85■□□□□ 0.45
SSBP4-214ENST00000607020 OSBP2Q969R2 916 aa17.85■□□□□ 0.45
SSBP4-214ENST00000607020 PDGFCQ9NRA1 345 aa17.85■□□□□ 0.45
SSBP4-214ENST00000607020 RNF146Q9NTX7 359 aa17.85■□□□□ 0.45
SSBP4-214ENST00000607020 PLXNA1Q9UIW2 1896 aa17.85■□□□□ 0.45
SSBP4-214ENST00000607020 PLIN4Q96Q06 1357 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 GTPBP6O43824 516 aaPredicted RBP17.84■□□□□ 0.45
SSBP4-214ENST00000607020 GNAT2P19087 354 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 KCNQ1P51787 676 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 STAT2P52630 851 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 PSMC6P62333 389 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 TTLL4Q14679 1199 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 APPBP2Q92624 585 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 SCLYQ96I15 445 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 VTA1Q9NP79 307 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 CYP39A1Q9NYL5 469 aa17.84■□□□□ 0.45
SSBP4-214ENST00000607020 ZBBXA8MT70 800 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 TLL1O43897 1013 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 RFC2P35250 354 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 DUSP28Q4G0W2 176 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 LRRC47Q8N1G4 583 aaKnown RBP17.83■□□□□ 0.44
SSBP4-214ENST00000607020 MICALL1Q8N3F8 863 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 KBTBD3Q8NAB2 608 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 LRFN3Q9BTN0 628 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 EPB41L4AQ9HCS5 686 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-214ENST00000607020 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.44
SSBP4-214ENST00000607020 GREB1LQ9C091 1923 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-214ENST00000607020 LOC102724159A0A0B4J2E5 919 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 PATL2C9JE40 543 aaKnown RBP17.82■□□□□ 0.44
SSBP4-214ENST00000607020 PRDM1O75626 825 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 CA3P07451 260 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 PTGS1P23219 599 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 PWP2Q15269 919 aaKnown RBP17.82■□□□□ 0.44
SSBP4-214ENST00000607020 SKIV2LQ15477 1246 aaKnown RBP17.82■□□□□ 0.44
SSBP4-214ENST00000607020 SLC9A7Q96T83 725 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 BCL11AQ9H165 835 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 EPHX3Q9H6B9 360 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 POLR3EQ9NVU0 708 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 XIRP2A4UGR9 3374 aa17.82■□□□□ 0.44
SSBP4-214ENST00000607020 TNKSO95271 1327 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 RFXAPO00287 272 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 RNF113AO15541 343 aaKnown RBP17.81■□□□□ 0.44
SSBP4-214ENST00000607020 ZFYP08048 801 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-214ENST00000607020 ACTN1P12814 892 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 SLC1A4P43007 532 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 PPP4R3BQ5MIZ7 849 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 TMEM63BQ5T3F8 832 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 KIAA1211Q6ZU35 1233 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 FBXO16Q8IX29 292 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-214ENST00000607020 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
SSBP4-214ENST00000607020 ECHDC1Q9NTX5 307 aa17.81■□□□□ 0.44
SSBP4-214ENST00000607020 TRMT13Q9NUP7 481 aaKnown RBP17.81■□□□□ 0.44
SSBP4-214ENST00000607020 RBM47A0AV96 593 aaKnown RBP17.8■□□□□ 0.44
SSBP4-214ENST00000607020 EPOPA6NHQ4 379 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 GPAA1O43292 621 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 TSPY3P0CV98 308 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 TSPY8P0CW00 308 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 CYP2C9P11712 490 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 ALAS1P13196 640 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 TDO2P48775 406 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 PURAQ00577 322 aaKnown RBP17.8■□□□□ 0.44
SSBP4-214ENST00000607020 TAP1Q03518 808 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 MUM1L1Q5H9M0 696 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 TMEM31Q5JXX7 168 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 RCSD1Q6JBY9 416 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 HLA-CQ95604 372 aa17.8■□□□□ 0.44
SSBP4-214ENST00000607020 HCN4Q9Y3Q4 1203 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms