RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 CYP39A1Q9NYL5 469 aa28.71■■■□□ 2.19
SNX5-219ENST00000606602 A0A0U1RQG5 324 aaPredicted RBP28.7■■■□□ 2.18
SNX5-219ENST00000606602 ICAM1P05362 532 aa28.7■■■□□ 2.18
SNX5-219ENST00000606602 TOP1P11387 765 aaKnown RBP28.7■■■□□ 2.18
SNX5-219ENST00000606602 SLC16A2P36021 539 aa28.7■■■□□ 2.18
SNX5-219ENST00000606602 NSMFQ6X4W1 530 aa28.7■■■□□ 2.18
SNX5-219ENST00000606602 ZNF589Q86UQ0 364 aaPredicted RBP28.7■■■□□ 2.18
SNX5-219ENST00000606602 RILPL2Q969X0 211 aa28.7■■■□□ 2.18
SNX5-219ENST00000606602 TMEM47Q9BQJ4 181 aa28.7■■■□□ 2.18
SNX5-219ENST00000606602 SEMA6BQ9H3T3 888 aa28.7■■■□□ 2.18
SNX5-219ENST00000606602 TBX21Q9UL17 535 aa28.7■■■□□ 2.18
SNX5-219ENST00000606602 DDX49Q9Y6V7 483 aaKnown RBP28.7■■■□□ 2.18
SNX5-219ENST00000606602 ARVCFO00192 962 aa28.69■■■□□ 2.18
SNX5-219ENST00000606602 CTAGE5O15320 804 aa28.69■■■□□ 2.18
SNX5-219ENST00000606602 TIMP1P01033 207 aa28.69■■■□□ 2.18
SNX5-219ENST00000606602 HAND2P61296 217 aa28.69■■■□□ 2.18
SNX5-219ENST00000606602 BEX3Q00994 111 aa28.69■■■□□ 2.18
SNX5-219ENST00000606602 ASTN1O14525 1302 aa28.69■■■□□ 2.18
SNX5-219ENST00000606602 NKX3-2P78367 333 aa28.68■■■□□ 2.18
SNX5-219ENST00000606602 CDX2Q99626 313 aaPredicted RBP28.68■■■□□ 2.18
SNX5-219ENST00000606602 RANBP17Q9H2T7 1088 aaKnown RBP28.68■■■□□ 2.18
SNX5-219ENST00000606602 GPCPD1Q9NPB8 672 aa28.68■■■□□ 2.18
SNX5-219ENST00000606602 TCP11L1Q9NUJ3 509 aa28.68■■■□□ 2.18
SNX5-219ENST00000606602 FRMPD2Q68DX3 1309 aaPredicted RBP28.68■■■□□ 2.18
SNX5-219ENST00000606602 CCDC171Q6TFL3 1326 aa28.68■■■□□ 2.18
SNX5-219ENST00000606602 SYDE2Q5VT97 1194 aa28.67■■■□□ 2.18
SNX5-219ENST00000606602 B4GALNT3Q6L9W6 998 aa28.67■■■□□ 2.18
SNX5-219ENST00000606602 BTNL9Q6UXG8 535 aa28.67■■■□□ 2.18
SNX5-219ENST00000606602 EEPD1Q7L9B9 569 aa28.67■■■□□ 2.18
SNX5-219ENST00000606602 TLK2Q86UE8 772 aa28.67■■■□□ 2.18
SNX5-219ENST00000606602 AP5M1Q9H0R1 490 aa28.67■■■□□ 2.18
SNX5-219ENST00000606602 GNEQ9Y223 722 aaKnown RBP28.67■■■□□ 2.18
SNX5-219ENST00000606602 ZMYM6O95789 1325 aa28.67■■■□□ 2.18
SNX5-219ENST00000606602 AAMPQ13685 434 aa28.66■■■□□ 2.18
SNX5-219ENST00000606602 MFSD5Q6N075 450 aa28.66■■■□□ 2.18
SNX5-219ENST00000606602 FBXO16Q8IX29 292 aaPredicted RBP28.66■■■□□ 2.18
SNX5-219ENST00000606602 PURBQ96QR8 312 aaKnown RBP28.66■■■□□ 2.18
SNX5-219ENST00000606602 RWDD1Q9H446 243 aaPredicted RBP28.66■■■□□ 2.18
SNX5-219ENST00000606602 PDGFCQ9NRA1 345 aa28.66■■■□□ 2.18
SNX5-219ENST00000606602 MCM3APO60318 1980 aa28.66■■■□□ 2.18
SNX5-219ENST00000606602 TLR3O15455 904 aaKnown RBP28.65■■■□□ 2.18
SNX5-219ENST00000606602 DYNC1LI2O43237 492 aaPredicted RBP28.65■■■□□ 2.18
SNX5-219ENST00000606602 SMPD1P17405 629 aa28.65■■■□□ 2.18
SNX5-219ENST00000606602 IQSEC1Q6DN90 963 aa28.65■■■□□ 2.18
SNX5-219ENST00000606602 CXCL17Q6UXB2 119 aa28.65■■■□□ 2.18
SNX5-219ENST00000606602 MFSD6Q6ZSS7 791 aa28.65■■■□□ 2.18
SNX5-219ENST00000606602 TTYH1Q9H313 450 aaPredicted RBP28.65■■■□□ 2.18
SNX5-219ENST00000606602 PTGS1P23219 599 aa28.64■■■□□ 2.18
SNX5-219ENST00000606602 BAATQ14032 418 aaPredicted RBP28.64■■■□□ 2.18
SNX5-219ENST00000606602 FSCN1Q16658 493 aaKnown RBP28.64■■■□□ 2.18
SNX5-219ENST00000606602 AKNAD1Q5T1N1 836 aa28.64■■■□□ 2.18
SNX5-219ENST00000606602 TAPT1Q6NXT6 567 aa28.64■■■□□ 2.18
SNX5-219ENST00000606602 FAM126BQ8IXS8 530 aa28.64■■■□□ 2.18
SNX5-219ENST00000606602 SMC5Q8IY18 1101 aa28.64■■■□□ 2.18
SNX5-219ENST00000606602 CABYRO75952 493 aa28.63■■■□□ 2.17
SNX5-219ENST00000606602 PDHBP11177 359 aa28.63■■■□□ 2.17
SNX5-219ENST00000606602 PCP11498 1178 aaKnown RBP28.63■■■□□ 2.17
SNX5-219ENST00000606602 MFAP1P55081 439 aaKnown RBP28.63■■■□□ 2.17
SNX5-219ENST00000606602 YTHDC1Q96MU7 727 aaKnown RBP28.63■■■□□ 2.17
SNX5-219ENST00000606602 TTC14Q96N46 770 aa28.63■■■□□ 2.17
SNX5-219ENST00000606602 PPP1R12CQ9BZL4 782 aa28.63■■■□□ 2.17
SNX5-219ENST00000606602 VTA1Q9NP79 307 aa28.63■■■□□ 2.17
SNX5-219ENST00000606602 ADD3Q9UEY8 706 aaKnown RBP28.63■■■□□ 2.17
SNX5-219ENST00000606602 NFIBO00712 420 aa28.62■■■□□ 2.17
SNX5-219ENST00000606602 SDSP20132 328 aa28.62■■■□□ 2.17
SNX5-219ENST00000606602 PPIGQ13427 754 aaKnown RBP eCLIP28.62■■■□□ 2.17
SNX5-219ENST00000606602 KIAA1211Q6ZU35 1233 aa28.62■■■□□ 2.17
SNX5-219ENST00000606602 CHD1LQ86WJ1 897 aa28.62■■■□□ 2.17
SNX5-219ENST00000606602 TBC1D10CQ8IV04 446 aa28.62■■■□□ 2.17
SNX5-219ENST00000606602 TMEM199Q8N511 208 aa28.62■■■□□ 2.17
SNX5-219ENST00000606602 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.62■■■□□ 2.171e-58■□□□□ 9.9
SNX5-219ENST00000606602 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.61■■■□□ 2.17
SNX5-219ENST00000606602 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.61■■■□□ 2.17
SNX5-219ENST00000606602 ZEB2O60315 1214 aa28.61■■■□□ 2.17
SNX5-219ENST00000606602 TMEM63BQ5T3F8 832 aa28.61■■■□□ 2.17
SNX5-219ENST00000606602 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.61■■■□□ 2.17
SNX5-219ENST00000606602 MORC4Q8TE76 937 aa28.61■■■□□ 2.17
SNX5-219ENST00000606602 MYLIPQ8WY64 445 aa28.61■■■□□ 2.17
SNX5-219ENST00000606602 RNF41Q9H4P4 317 aaPredicted RBP28.61■■■□□ 2.17
SNX5-219ENST00000606602 PTPDC1A2A3K4 754 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 CD4P01730 458 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 CSF2RAP15509 400 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 ALDH5A1P51649 535 aaPredicted RBP28.6■■■□□ 2.17
SNX5-219ENST00000606602 ZNF543Q08ER8 600 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 ITGA7Q13683 1181 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 PLEKHM2Q8IWE5 1019 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 SLC43A3Q8NBI5 491 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 Q9Y3F1 56 aa28.6■■■□□ 2.17
SNX5-219ENST00000606602 TMEM265A0A087WTH1 108 aa28.59■■■□□ 2.17
SNX5-219ENST00000606602 ZNF213O14771 459 aa28.59■■■□□ 2.17
SNX5-219ENST00000606602 C16orf59Q7L2K0 433 aa28.59■■■□□ 2.17
SNX5-219ENST00000606602 ESR2Q92731 530 aa28.59■■■□□ 2.17
SNX5-219ENST00000606602 PNMA2Q9UL42 364 aa28.59■■■□□ 2.17
SNX5-219ENST00000606602 IGHDP01880 384 aa28.58■■■□□ 2.17
SNX5-219ENST00000606602 CALML3P27482 149 aa28.58■■■□□ 2.17
SNX5-219ENST00000606602 NUCB1Q02818 461 aa28.58■■■□□ 2.17
SNX5-219ENST00000606602 TMEM240Q5SV17 173 aa28.58■■■□□ 2.17
SNX5-219ENST00000606602 SLC30A10Q6XR72 485 aa28.58■■■□□ 2.17
SNX5-219ENST00000606602 MAFAQ8NHW3 353 aaPredicted RBP28.58■■■□□ 2.17
SNX5-219ENST00000606602 CLEC4DQ8WXI8 215 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms