RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 E4F1Q66K89 784 aaPredicted RBP22.39■■□□□ 1.17
MMP28-201ENST00000605424 COA7Q96BR5 231 aa22.39■■□□□ 1.17
MMP28-201ENST00000605424 SIPA1L1O43166 1804 aa22.38■■□□□ 1.17
MMP28-201ENST00000605424 USP27XA6NNY8 438 aa22.38■■□□□ 1.17
MMP28-201ENST00000605424 MRPL12P52815 198 aaKnown RBP22.38■■□□□ 1.17
MMP28-201ENST00000605424 PAK1Q13153 545 aa22.38■■□□□ 1.17
MMP28-201ENST00000605424 AOC3Q16853 763 aa22.38■■□□□ 1.17
MMP28-201ENST00000605424 APTXQ7Z2E3 356 aaKnown RBP22.38■■□□□ 1.17
MMP28-201ENST00000605424 IGSF22Q8N9C0 903 aa22.38■■□□□ 1.17
MMP28-201ENST00000605424 ATRNL1Q5VV63 1379 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 DDTLA6NHG4 134 aaPredicted RBP22.37■■□□□ 1.17
MMP28-201ENST00000605424 RIOK3O14730 519 aaKnown RBP22.37■■□□□ 1.17
MMP28-201ENST00000605424 CCDC96Q2M329 555 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 CLEC10AQ8IUN9 316 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 MTMR9Q96QG7 549 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 MTFR1LQ9H019 292 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 LRRC10BA6NIK2 292 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 CLK2P49760 499 aaKnown RBP22.37■■□□□ 1.17
MMP28-201ENST00000605424 FXR2P51116 673 aaKnown RBP eCLIP22.37■■□□□ 1.17
MMP28-201ENST00000605424 HSP90AA4PQ58FG1 418 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 PPP4R3AQ6IN85 833 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 TMEM179Q6ZVK1 233 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 SMYD4Q8IYR2 804 aaPredicted RBP22.37■■□□□ 1.17
MMP28-201ENST00000605424 CUL5Q93034 780 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 NAP1L4Q99733 375 aaKnown RBP22.37■■□□□ 1.17
MMP28-201ENST00000605424 SGIP1Q9BQI5 828 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 ADD3Q9UEY8 706 aaKnown RBP22.37■■□□□ 1.17
MMP28-201ENST00000605424 CTNND2Q9UQB3 1225 aa22.37■■□□□ 1.17
MMP28-201ENST00000605424 PP2D1A8MPX8 630 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 RHOBTB3O94955 611 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 PTGER2P43116 358 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 STX17P56962 302 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 AMPD3Q01432 767 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 ATP2B2Q01814 1243 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 TCP10Q12799 353 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 ZSCAN29Q8IWY8 852 aaPredicted RBP22.36■■□□□ 1.17
MMP28-201ENST00000605424 CCDC47Q96A33 483 aaKnown RBP22.36■■□□□ 1.17
MMP28-201ENST00000605424 RAB34Q9BZG1 259 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 TMEM260Q9NX78 707 aa22.36■■□□□ 1.17
MMP28-201ENST00000605424 ARHGAP6O43182 974 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 PPP1R2P41236 205 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 PDIA5Q14554 519 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 CALCRLQ16602 461 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 TMEM266Q2M3C6 531 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 SH3BP5LQ7L8J4 393 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 ANKRD20A12PQ8NF67 263 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 CALML4Q96GE6 196 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 TRMT1Q9NXH9 659 aaKnown RBP22.35■■□□□ 1.17
MMP28-201ENST00000605424 ZNF219Q9P2Y4 722 aaPredicted RBP22.35■■□□□ 1.17
MMP28-201ENST00000605424 LIMA1Q9UHB6 759 aaKnown RBP22.35■■□□□ 1.17
MMP28-201ENST00000605424 H7C1D1 291 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 STX10O60499 249 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 EEF2P13639 858 aaKnown RBP22.35■■□□□ 1.17
MMP28-201ENST00000605424 STIM1Q13586 685 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 TTBK2Q6IQ55 1244 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 MTERF4Q7Z6M4 381 aaKnown RBP22.35■■□□□ 1.17
MMP28-201ENST00000605424 ADSSL1Q8N142 457 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 PPP1R13BQ96KQ4 1090 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 SYNPO2Q9UMS6 1093 aa22.35■■□□□ 1.17
MMP28-201ENST00000605424 GCFC2P16383 781 aaKnown RBP22.34■■□□□ 1.17
MMP28-201ENST00000605424 PLCG1P19174 1290 aa22.34■■□□□ 1.17
MMP28-201ENST00000605424 TECP42680 631 aa22.34■■□□□ 1.17
MMP28-201ENST00000605424 CACNB3P54284 484 aa22.34■■□□□ 1.17
MMP28-201ENST00000605424 NELFBQ8WX92 580 aa22.34■■□□□ 1.17
MMP28-201ENST00000605424 C7orf25Q9BPX7 421 aa22.34■■□□□ 1.17
MMP28-201ENST00000605424 PCDHAC2Q9Y5I4 1007 aa22.34■■□□□ 1.17
MMP28-201ENST00000605424 CTIFO43310 598 aaKnown RBP22.33■■□□□ 1.17
MMP28-201ENST00000605424 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 KLRC4O43908 158 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 PPP1R11O60927 126 aaPredicted RBP22.33■■□□□ 1.17
MMP28-201ENST00000605424 PBX1P40424 430 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 SLC1A4P43007 532 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 MCTP2Q6DN12 878 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 KCTD1Q719H9 257 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 RTKN2Q8IZC4 609 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 KIF18AQ8NI77 898 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 MAP7D2Q96T17 732 aa22.33■■□□□ 1.17
MMP28-201ENST00000605424 USP17L10C9JJH3 530 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 RRP9O43818 475 aaKnown RBP22.33■■□□□ 1.16
MMP28-201ENST00000605424 HOXA7P31268 230 aaPredicted RBP22.33■■□□□ 1.16
MMP28-201ENST00000605424 PRCPP42785 496 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 KMT5BQ4FZB7 885 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 SLFN13Q68D06 897 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 TC2NQ8N9U0 490 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 GIMAP8Q8ND71 665 aaPredicted RBP22.33■■□□□ 1.16
MMP28-201ENST00000605424 GMCL1P1Q8NEA9 526 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 BAG1Q99933 345 aaPredicted RBP22.33■■□□□ 1.16
MMP28-201ENST00000605424 PSTPIP2Q9H939 334 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 STK17AQ9UEE5 414 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 ITIH6Q6UXX5 1313 aa22.33■■□□□ 1.16
MMP28-201ENST00000605424 PSME4Q14997 1843 aa22.32■■□□□ 1.16
MMP28-201ENST00000605424 ZSCAN12O43309 604 aa22.32■■□□□ 1.16
MMP28-201ENST00000605424 ICA1Q05084 483 aa22.32■■□□□ 1.16
MMP28-201ENST00000605424 TMEM139Q8IV31 216 aa22.32■■□□□ 1.16
MMP28-201ENST00000605424 SLC16A2P36021 539 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 TXKP42681 527 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 ABCB5Q2M3G0 1257 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 CCDC93Q567U6 631 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 GMCL1Q96IK5 515 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms