RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 LINC00301Q8NCQ3 95 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 CUL5Q93034 780 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 TNFRSF25Q93038 417 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 SLF1Q9BQI6 1058 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 RPAP3Q9H6T3 665 aaPredicted RBP14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 ZNF408Q9H9D4 720 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 ELP3Q9H9T3 547 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 PCDHA6Q9UN73 950 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 PCDHA8Q9Y5H6 950 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 PTPRFP10586 1907 aa14.49□□□□□ -0.09
HERPUD2-207ENST00000603731 FLOT1O75955 427 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 BMP15O95972 392 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 TRAPPC10P48553 1259 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 HMGCS2P54868 508 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 USH1GQ495M9 461 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 CCDC174Q6PII3 467 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 ERO1BQ86YB8 467 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 REXO1Q8N1G1 1221 aaKnown RBP14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 RASGRP4Q8TDF6 673 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 SYAP1Q96A49 352 aaPredicted RBP14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 C12orf42Q96LP6 360 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 RANBP17Q9H2T7 1088 aaKnown RBP14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 PSTPIP2Q9H939 334 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 RIC8AQ9NPQ8 531 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 FBXO28Q9NVF7 368 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 PARP14Q460N5 1801 aa14.48□□□□□ -0.09
HERPUD2-207ENST00000603731 FAM205CA6NFA0 338 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 M0R2N6 131 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 CELF2O95319 508 aaKnown RBP14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 FDX1P10109 184 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 TOB1P50616 345 aaPredicted RBP14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 PPATQ06203 517 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 SLC39A14Q15043 492 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 NONOQ15233 471 aaKnown RBP eCLIP14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 EARS2Q5JPH6 523 aaKnown RBP14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 TTC38Q5R3I4 469 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 JAKMIP3Q5VZ66 844 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 MOB2Q70IA6 237 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 GPT2Q8TD30 523 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 HHIPL1Q96JK4 782 aa14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 BIN2Q9UBW5 565 aaPredicted RBP14.47□□□□□ -0.09
HERPUD2-207ENST00000603731 SPDYE5A6NIY4 337 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 ZBED4O75132 1171 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 PPP6R2O75170 966 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 SH3D19Q5HYK7 790 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 MCTP2Q6DN12 878 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 OTUD5Q96G74 571 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 PGBD1Q96JS3 809 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 PNMA2Q9UL42 364 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 PPP1R9AQ9ULJ8 1098 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 MRPL11Q9Y3B7 192 aaKnown RBP14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 PCDHB6Q9Y5E3 794 aa14.46□□□□□ -0.09
HERPUD2-207ENST00000603731 ABCB11O95342 1321 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 SMCHD1A6NHR9 2005 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L15C9J2P7 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L13C9JLJ4 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L11C9JVI0 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L18D6R9N7 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L22D6RA61 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L17D6RBQ6 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L19D6RCP7 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L20D6RJB6 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 ADAMTS3O15072 1205 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 MARCKSP29966 332 aaPredicted RBP14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 FXR1P51114 621 aaKnown RBP eCLIP14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 USP17L24Q0WX57 530 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 PTPAQ15257 358 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 ZNF174Q15697 407 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 INF2Q27J81 1249 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 NOM1Q5C9Z4 860 aaKnown RBP14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 ADALQ6DHV7 355 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 CAVIN1Q6NZI2 390 aaKnown RBP14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 GADL1Q6ZQY3 521 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 C2orf69Q8N8R5 385 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 SLC10A4Q96EP9 437 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 CLMNQ96JQ2 1002 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 GZF1Q9H116 711 aaPredicted RBP14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 TMEM260Q9NX78 707 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 PCDHA7Q9UN72 937 aa14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 COL11A1P12107 1806 aaPredicted RBP14.45□□□□□ -0.1
HERPUD2-207ENST00000603731 UNCXA6NJT0 531 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 CXCL11O14625 94 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 FKBP1BP68106 108 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 NOGQ13253 232 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 PPIL2Q13356 520 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 UBE2SQ16763 222 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 CCDC73Q6ZRK6 1079 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 NEK8Q86SG6 692 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 CCAR1Q8IX12 1150 aaKnown RBP14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 OPTNQ96CV9 577 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 GBA2Q9HCG7 927 aaPredicted RBP14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 CCPG1Q9ULG6 757 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 MYH7BA7E2Y1 1941 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 LOC285556D6RIA3 1793 aa14.44□□□□□ -0.1
HERPUD2-207ENST00000603731 A0A1W2PQ27 194 aa14.43□□□□□ -0.1
HERPUD2-207ENST00000603731 A0A1W2PQ64 194 aa14.43□□□□□ -0.1
HERPUD2-207ENST00000603731 A0A1W2PQD8 194 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms