RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 CLIP2Q9UDT6 1046 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 FBXO40Q9UH90 709 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 ZBBXA8MT70 800 aa19.19■□□□□ 0.66
SSBP4-211ENST00000601614 CABYRO75952 493 aa19.19■□□□□ 0.66
SSBP4-211ENST00000601614 CA3P07451 260 aa19.19■□□□□ 0.66
SSBP4-211ENST00000601614 ATP2A2P16615 1042 aaKnown RBP19.19■□□□□ 0.66
SSBP4-211ENST00000601614 AAK1Q2M2I8 961 aa19.19■□□□□ 0.66
SSBP4-211ENST00000601614 DDRGK1Q96HY6 314 aa19.19■□□□□ 0.66
SSBP4-211ENST00000601614 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.668e-8■■■■□ 24
SSBP4-211ENST00000601614 C11orf16Q9NQ32 467 aa19.19■□□□□ 0.66
SSBP4-211ENST00000601614 A1CFQ9NQ94 594 aaKnown RBP19.19■□□□□ 0.66
SSBP4-211ENST00000601614 ARPP21Q9UBL0 812 aaPredicted RBP19.19■□□□□ 0.66
SSBP4-211ENST00000601614 TANC1Q9C0D5 1861 aa19.19■□□□□ 0.66
SSBP4-211ENST00000601614 DYNC1LI2O43237 492 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-211ENST00000601614 TLL1O43897 1013 aa19.18■□□□□ 0.66
SSBP4-211ENST00000601614 ATP5JP18859 108 aa19.18■□□□□ 0.66
SSBP4-211ENST00000601614 SBK1Q52WX2 424 aa19.18■□□□□ 0.66
SSBP4-211ENST00000601614 RPUSD2Q8IZ73 545 aaKnown RBP19.18■□□□□ 0.66
SSBP4-211ENST00000601614 LRRC47Q8N1G4 583 aaKnown RBP19.18■□□□□ 0.66
SSBP4-211ENST00000601614 HAUS7Q99871 368 aa19.18■□□□□ 0.66
SSBP4-211ENST00000601614 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-211ENST00000601614 ZNF536O15090 1300 aa19.18■□□□□ 0.66
SSBP4-211ENST00000601614 MUC6Q6W4X9 2439 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 OAZ1P54368 228 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 TAPT1Q6NXT6 567 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 SPRED2Q7Z698 418 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 SIRT2Q8IXJ6 389 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 PANK1Q8TE04 598 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 CEP95Q96GE4 821 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 FEM1BQ9UK73 627 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 ARIH1Q9Y4X5 557 aaPredicted RBP19.17■□□□□ 0.66
SSBP4-211ENST00000601614 SCN10AQ9Y5Y9 1956 aa19.17■□□□□ 0.66
SSBP4-211ENST00000601614 TRIP12Q14669 1992 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-211ENST00000601614 GSG1L2A8MUP6 293 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 CYP2C9P11712 490 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 TMEM67Q5HYA8 995 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 EEPD1Q7L9B9 569 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 DEFB128Q7Z7B8 93 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 FBXO16Q8IX29 292 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-211ENST00000601614 MKL1Q969V6 931 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 STRBPQ96SI9 672 aaKnown RBP19.16■□□□□ 0.66
SSBP4-211ENST00000601614 ALDH8A1Q9H2A2 487 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-211ENST00000601614 ACAD9Q9H845 621 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 MKNK2Q9HBH9 465 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 TRMT13Q9NUP7 481 aaKnown RBP19.16■□□□□ 0.66
SSBP4-211ENST00000601614 HCN4Q9Y3Q4 1203 aa19.16■□□□□ 0.66
SSBP4-211ENST00000601614 MINDY4BA8MYZ0 360 aa19.15■□□□□ 0.66
SSBP4-211ENST00000601614 PRDM1O75626 825 aa19.15■□□□□ 0.66
SSBP4-211ENST00000601614 TAP1Q03518 808 aa19.15■□□□□ 0.66
SSBP4-211ENST00000601614 TMEM31Q5JXX7 168 aa19.15■□□□□ 0.66
SSBP4-211ENST00000601614 PURBQ96QR8 312 aaKnown RBP19.15■□□□□ 0.66
SSBP4-211ENST00000601614 AP5M1Q9H0R1 490 aa19.15■□□□□ 0.66
SSBP4-211ENST00000601614 RNF146Q9NTX7 359 aa19.15■□□□□ 0.66
SSBP4-211ENST00000601614 MTMR4Q9NYA4 1195 aa19.15■□□□□ 0.66
SSBP4-211ENST00000601614 FAM86C2PA6NEL3 165 aa19.14■□□□□ 0.65
SSBP4-211ENST00000601614 GTPBP6O43824 516 aaPredicted RBP19.14■□□□□ 0.65
SSBP4-211ENST00000601614 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.65
SSBP4-211ENST00000601614 EPB41L4AQ9HCS5 686 aaPredicted RBP19.14■□□□□ 0.65
SSBP4-211ENST00000601614 CD320Q9NPF0 282 aa19.14■□□□□ 0.65
SSBP4-211ENST00000601614 PIEZO1Q92508 2521 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 ASB14A6NK59 587 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 ZEB2O60315 1214 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 LPXNO60711 386 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 MUM1L1Q5H9M0 696 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 SLFN13Q68D06 897 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 PPP1R13LQ8WUF5 828 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 ARNTL2Q8WYA1 636 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 CHMP4CQ96CF2 233 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 SEZ6LQ9BYH1 1024 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 COG5Q9UP83 839 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 COG6Q9Y2V7 657 aa19.13■□□□□ 0.65
SSBP4-211ENST00000601614 TNKSO95271 1327 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 TMEM232C9JQI7 657 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 PFKMP08237 780 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 BMP3P12645 472 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 SNAP25P60880 206 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 IQSEC1Q6DN90 963 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 TRERF1Q96PN7 1200 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 Q9Y3F1 56 aa19.12■□□□□ 0.65
SSBP4-211ENST00000601614 GPR37L1O60883 481 aa19.11■□□□□ 0.65
SSBP4-211ENST00000601614 TTLL1O95922 423 aa19.11■□□□□ 0.65
SSBP4-211ENST00000601614 ALAS1P13196 640 aa19.11■□□□□ 0.65
SSBP4-211ENST00000601614 GRB10Q13322 594 aa19.11■□□□□ 0.65
SSBP4-211ENST00000601614 RASGRP2Q7LDG7 609 aa19.11■□□□□ 0.65
SSBP4-211ENST00000601614 RPAP2Q8IXW5 612 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-211ENST00000601614 OSBP2Q969R2 916 aa19.11■□□□□ 0.65
SSBP4-211ENST00000601614 PLIN4Q96Q06 1357 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 RBAK-RBAKDNI3L0D1 243 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 STAT2P52630 851 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 PURAQ00577 322 aaKnown RBP19.1■□□□□ 0.65
SSBP4-211ENST00000601614 GIMAP6Q6P9H5 292 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 KIAA1211Q6ZU35 1233 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 ZNF444Q8N0Y2 327 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-211ENST00000601614 MORC4Q8TE76 937 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 HLA-CQ95604 372 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 SLC9A7Q96T83 725 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 CYP39A1Q9NYL5 469 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 SYNPO2Q9UMS6 1093 aa19.1■□□□□ 0.65
SSBP4-211ENST00000601614 CCER2I3L3R5 266 aa19.09■□□□□ 0.65
SSBP4-211ENST00000601614 RAB11FIP3O75154 756 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms