RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 SHISA4Q96DD7 197 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 JMJD4Q9H9V9 463 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 DIS3Q9Y2L1 958 aaKnown RBP14.9□□□□□ -0.02
USE1-209ENST00000601592 SLC12A7Q9Y666 1083 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 WDR19Q8NEZ3 1342 aa14.9□□□□□ -0.02
USE1-209ENST00000601592 DNAJC25-GNG10A0A024R161 153 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 NFIBO00712 420 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 KIF5BP33176 963 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 LIFRP42702 1097 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 CNTN2Q02246 1040 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 PRAMEF19Q5SWL8 479 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.89□□□□□ -0.03
USE1-209ENST00000601592 MICU3Q86XE3 530 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 FBXO11Q86XK2 927 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 TINF2Q9BSI4 451 aa14.89□□□□□ -0.03
USE1-209ENST00000601592 CALM1P0DP23 149 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 CALM2P0DP24 149 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 CALM3P0DP25 149 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 CYBAP13498 195 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 CASTP20810 708 aaKnown RBP14.88□□□□□ -0.03
USE1-209ENST00000601592 CALML3P27482 149 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 BAATQ14032 418 aaPredicted RBP14.88□□□□□ -0.03
USE1-209ENST00000601592 ANO1Q5XXA6 986 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 KCNB2Q92953 911 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 USP26Q9BXU7 913 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 CYP39A1Q9NYL5 469 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 CNPY2Q9Y2B0 182 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 LRRC37A2A6NM11 1700 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 ABCB11O95342 1321 aa14.88□□□□□ -0.03
USE1-209ENST00000601592 EPB41L2O43491 1005 aaKnown RBP14.87□□□□□ -0.03
USE1-209ENST00000601592 FARP2O94887 1054 aaPredicted RBP14.87□□□□□ -0.03
USE1-209ENST00000601592 PSMA5P28066 241 aa14.87□□□□□ -0.03
USE1-209ENST00000601592 EXOSC10Q01780 885 aaKnown RBP14.87□□□□□ -0.03
USE1-209ENST00000601592 SLC30A10Q6XR72 485 aa14.87□□□□□ -0.03
USE1-209ENST00000601592 RNF207Q6ZRF8 634 aa14.87□□□□□ -0.03
USE1-209ENST00000601592 FAM133AQ8N9E0 248 aa14.87□□□□□ -0.03
USE1-209ENST00000601592 CLEC4DQ8WXI8 215 aa14.87□□□□□ -0.03
USE1-209ENST00000601592 PIGSQ96S52 555 aa14.87□□□□□ -0.03
USE1-209ENST00000601592 ZHX1Q9UKY1 873 aaPredicted RBP14.87□□□□□ -0.03
USE1-209ENST00000601592 PDE4DIPQ5VU43 2346 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 KLF18A0A0U1RQI7 1052 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 ZBTB5O15062 677 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 PLEKHA8P1O95397 391 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
USE1-209ENST00000601592 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 GNAQP50148 359 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 APOA5Q6Q788 366 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 Q6ZUG5 572 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 ARMCX2Q7L311 632 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 ZNF467Q7Z7K2 595 aaPredicted RBP14.86□□□□□ -0.03
USE1-209ENST00000601592 SGMS1Q86VZ5 419 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 CMTR1Q8N1G2 835 aaKnown RBP14.86□□□□□ -0.03
USE1-209ENST00000601592 FGD4Q96M96 766 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 PURBQ96QR8 312 aaKnown RBP14.86□□□□□ -0.03
USE1-209ENST00000601592 MAP3K14Q99558 947 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 AMNQ9BXJ7 453 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 DDX20Q9UHI6 824 aaKnown RBP14.86□□□□□ -0.03
USE1-209ENST00000601592 MRPL11Q9Y3B7 192 aaKnown RBP14.86□□□□□ -0.03
USE1-209ENST00000601592 SYNGAP1Q96PV0 1343 aa14.86□□□□□ -0.03
USE1-209ENST00000601592 SOWAHBA6NEL2 793 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 SEPT4O43236 478 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 ZBTB43O43298 467 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 CYTH3O43739 400 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 MSCO60682 206 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 IGHA2P01877 340 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 RPS6P62753 249 aaKnown RBP14.85□□□□□ -0.03
USE1-209ENST00000601592 APOBRQ0VD83 1088 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 SLC35G1Q2M3R5 365 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 CCDC82Q8N4S0 544 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 MSL3Q8N5Y2 521 aaKnown RBP14.85□□□□□ -0.03
USE1-209ENST00000601592 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 BRF1Q92994 677 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 RRP36Q96EU6 259 aaKnown RBP14.85□□□□□ -0.03
USE1-209ENST00000601592 LZTS2Q9BRK4 669 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 CRISPLD2Q9H0B8 497 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 RIOX1Q9H6W3 641 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.85□□□□□ -0.03
USE1-209ENST00000601592 SEC63Q9UGP8 760 aaKnown RBP14.85□□□□□ -0.03
USE1-209ENST00000601592 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 PCDHA1Q9Y5I3 950 aa14.85□□□□□ -0.03
USE1-209ENST00000601592 DDX49Q9Y6V7 483 aaKnown RBP14.85□□□□□ -0.03
USE1-209ENST00000601592 ASB14A6NK59 587 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 GOLGA8AA7E2F4 631 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 GOLGA8BA8MQT2 603 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
USE1-209ENST00000601592 PPP1R11O60927 126 aaPredicted RBP14.84□□□□□ -0.03
USE1-209ENST00000601592 SNAI1O95863 264 aaPredicted RBP14.84□□□□□ -0.03
USE1-209ENST00000601592 CFBP00751 764 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 RTN1Q16799 776 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 LHX8Q68G74 356 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 MAMDC4Q6UXC1 1216 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 MCF2L2Q86YR7 1114 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 DIS3LQ8TF46 1054 aaKnown RBP14.84□□□□□ -0.03
USE1-209ENST00000601592 MTMR8Q96EF0 704 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 SPZ1Q9BXG8 430 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 UPF3BQ9BZI7 483 aaKnown RBP14.84□□□□□ -0.03
USE1-209ENST00000601592 ADD3Q9UEY8 706 aaKnown RBP14.84□□□□□ -0.03
USE1-209ENST00000601592 NRBP1Q9UHY1 535 aa14.84□□□□□ -0.03
USE1-209ENST00000601592 OGDHLQ9ULD0 1010 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms