RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 HOXC10Q9NYD6 342 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 OGDHLQ9ULD0 1010 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 CDKL5O76039 1030 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 LARGE1O95461 756 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 CAPN2P17655 700 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 RXRAP19793 462 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 CYP2B6P20813 491 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 DSG3P32926 999 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 MAGEA10P43363 369 aaPredicted RBP13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 SYDE2Q5VT97 1194 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 RASGRP2Q7LDG7 609 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 P2RX7Q99572 595 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 PNMA2Q9UL42 364 aa13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
CHMP2A-207ENST00000600804 FRMPD2Q68DX3 1309 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 STK36Q9NRP7 1315 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 CPLX1O14810 134 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 ATP2A1O14983 1001 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 CYTH3O43739 400 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 RAD21O60216 631 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 FLOT1O75955 427 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 COL6A1P12109 1028 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 ST3GAL1Q11201 340 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 SLC35G1Q2M3R5 365 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 Q3C1V9 767 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 TTBK2Q6IQ55 1244 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 SRBD1Q8N5C6 995 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 USP6NLQ92738 828 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 RNF26Q9BY78 433 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 TANGO6Q9C0B7 1094 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 RANBP17Q9H2T7 1088 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 HMX1Q9NP08 348 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 PRR12Q9ULL5 1215 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 SMCHD1A6NHR9 2005 aa13.49□□□□□ -0.25
CHMP2A-207ENST00000600804 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 CNTNAP5Q8WYK1 1306 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 SPDYE16A6NNV3 312 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 PLEKHA8P1O95397 391 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 OAZ1P54368 228 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 IRX3P78415 501 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 STK3Q13188 491 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 BECN1Q14457 450 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 CCL14Q16627 93 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 NOL8Q76FK4 1167 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 RAB11FIP4Q86YS3 637 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 ADGRF4Q8IZF3 695 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 FAM177A1Q8N128 213 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 SMARCC2Q8TAQ2 1214 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 PORCNQ9H237 461 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 C11orf49Q9H6J7 331 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 SLC38A10Q9HBR0 1119 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 NCOA5Q9HCD5 579 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 RBPJLQ9UBG7 517 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 RBM19Q9Y4C8 960 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
CHMP2A-207ENST00000600804 hCG_1984214I3L0E3 225 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 VWA5AO00534 786 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 CTDNEP1O95476 244 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 CCND3P30281 292 aaPredicted RBP13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 ANP32AP39687 249 aaKnown RBP13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 HERVK_113P62684 666 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 TRAF1Q13077 416 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 LRIT3Q3SXY7 679 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 LHX8Q68G74 356 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 TEX2Q8IWB9 1127 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 DEFB123Q8N688 67 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 NECAB1Q8N987 351 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 REPS2Q8NFH8 660 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 UBA5Q9GZZ9 404 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 MUC3AQ02505 3323 aa13.47□□□□□ -0.25
CHMP2A-207ENST00000600804 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 ZBTB5O15062 677 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 SLC16A2P36021 539 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 LRRC26Q2I0M4 334 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 GPR153Q6NV75 609 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms