RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.17□□□□□ -0.62
COPE-210ENST00000600528 B4GALT4O60513 344 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 GPR37L1O60883 481 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 ZSCAN25Q6NSZ9 544 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 TRPV6Q9H1D0 765 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 RAVER2Q9HCJ3 691 aaKnown RBP11.17□□□□□ -0.62
COPE-210ENST00000600528 PAG1Q9NWQ8 432 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 Q9Y3F1 56 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 HCN4Q9Y3Q4 1203 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 MYH8P13535 1937 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 GREB1LQ9C091 1923 aaPredicted RBP11.17□□□□□ -0.62
COPE-210ENST00000600528 GBF1Q92538 1859 aa11.17□□□□□ -0.62
COPE-210ENST00000600528 RAD21O60216 631 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 PFKMP08237 780 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 FDX1P10109 184 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
COPE-210ENST00000600528 RASA1P20936 1047 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 CNTN2Q02246 1040 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 FSCN1Q16658 493 aaKnown RBP11.16□□□□□ -0.62
COPE-210ENST00000600528 LRRFIP1Q32MZ4 808 aaKnown RBP11.16□□□□□ -0.62
COPE-210ENST00000600528 SBK1Q52WX2 424 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 TMEM31Q5JXX7 168 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 HAUS7Q99871 368 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 C11orf16Q9NQ32 467 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 ARPP21Q9UBL0 812 aaPredicted RBP11.16□□□□□ -0.62
COPE-210ENST00000600528 FEM1BQ9UK73 627 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 SYNPO2Q9UMS6 1093 aa11.16□□□□□ -0.62
COPE-210ENST00000600528 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
COPE-210ENST00000600528 PRRC2BQ5JSZ5 2229 aaKnown RBP11.15□□□□□ -0.62
COPE-210ENST00000600528 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 RFXAPO00287 272 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
COPE-210ENST00000600528 ZEB2O60315 1214 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 CHGBP05060 677 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 CA3P07451 260 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 SMPD1P17405 629 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 TTLL4Q14679 1199 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 IQSEC1Q6DN90 963 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 TAPT1Q6NXT6 567 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 TLK2Q86UE8 772 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 PHOSPHO2Q8TCD6 241 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 SCLYQ96I15 445 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
COPE-210ENST00000600528 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
COPE-210ENST00000600528 MCM3APO60318 1980 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 EPOPA6NHQ4 379 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 ASB14A6NK59 587 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 DYNC1LI2O43237 492 aaPredicted RBP11.14□□□□□ -0.63
COPE-210ENST00000600528 SLC4A3P48751 1232 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 SKIV2LQ15477 1246 aaKnown RBP11.14□□□□□ -0.63
COPE-210ENST00000600528 ANKRD45Q5TZF3 282 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 B4GALNT3Q6L9W6 998 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 GIMAP6Q6P9H5 292 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 CENPQQ7L2Z9 268 aaPredicted RBP11.14□□□□□ -0.63
COPE-210ENST00000600528 GMCL1P1Q8NEA9 526 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
COPE-210ENST00000600528 AP5M1Q9H0R1 490 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
COPE-210ENST00000600528 BOLA2Q9H3K6 86 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
COPE-210ENST00000600528 CLIP2Q9UDT6 1046 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 CTDP1Q9Y5B0 961 aaPredicted RBP11.14□□□□□ -0.63
COPE-210ENST00000600528 TRANK1O15050 2925 aa11.14□□□□□ -0.63
COPE-210ENST00000600528 ZNF536O15090 1300 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 TTC41PQ6P2S7 1318 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 ZBBXA8MT70 800 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 PI4K2BG5E9Z4 385 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 SMARCA5O60264 1052 aaPredicted RBP11.13□□□□□ -0.63
COPE-210ENST00000600528 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 KCNA4P22459 653 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 PTGS1P23219 599 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 PSMC6P62333 389 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 NUCB1Q02818 461 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 TAP1Q03518 808 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 NOL8Q76FK4 1167 aaKnown RBP11.13□□□□□ -0.63
COPE-210ENST00000600528 TICAM2Q86XR7 235 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 MORC4Q8TE76 937 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.63
COPE-210ENST00000600528 HLA-CQ95604 372 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 STRBPQ96SI9 672 aaKnown RBP11.13□□□□□ -0.63
COPE-210ENST00000600528 SLC9A7Q96T83 725 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 MTMR4Q9NYA4 1195 aa11.13□□□□□ -0.63
COPE-210ENST00000600528 LPXNO60711 386 aa11.12□□□□□ -0.63
COPE-210ENST00000600528 ARHGEF15O94989 841 aa11.12□□□□□ -0.63
COPE-210ENST00000600528 ZFYP08048 801 aaPredicted RBP11.12□□□□□ -0.63
COPE-210ENST00000600528 BMP3P12645 472 aa11.12□□□□□ -0.63
COPE-210ENST00000600528 RFC2P35250 354 aa11.12□□□□□ -0.63
COPE-210ENST00000600528 TKFCQ3LXA3 575 aa11.12□□□□□ -0.63
COPE-210ENST00000600528 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms