RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 RNF26Q9BY78 433 aaPredicted RBP19.29■□□□□ 0.68
USHBP1-210ENST00000600286 ACAD9Q9H845 621 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 EFCC1Q9HA90 598 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 HOMER2Q9NSB8 354 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 RNF146Q9NTX7 359 aa19.29■□□□□ 0.68
USHBP1-210ENST00000600286 hCG_1984214I3L0E3 225 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 PEX10O60683 326 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 ECM2O94769 699 aaPredicted RBP19.28■□□□□ 0.68
USHBP1-210ENST00000600286 POTEEQ6S8J3 1075 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 HSCBQ8IWL3 235 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 ANKRD35Q8N283 1001 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 ZNF713Q8N859 430 aaPredicted RBP19.28■□□□□ 0.68
USHBP1-210ENST00000600286 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 WASF1Q92558 559 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 DDX11Q96FC9 970 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 MAF1Q9H063 256 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 PORCNQ9H237 461 aa19.28■□□□□ 0.68
USHBP1-210ENST00000600286 ZNF536O15090 1300 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 XBP1P17861 261 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 PRMT2P55345 433 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 GPR142Q7Z601 462 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 ABRAQ8N0Z2 381 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 CCDC12Q8WUD4 166 aaPredicted RBP19.27■□□□□ 0.68
USHBP1-210ENST00000600286 PHKBQ93100 1093 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 MMP19Q99542 508 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 NUDT12Q9BQG2 462 aa19.27■□□□□ 0.68
USHBP1-210ENST00000600286 LLPHQ9BRT6 129 aaKnown RBP19.27■□□□□ 0.68
USHBP1-210ENST00000600286 CNTNAP5Q8WYK1 1306 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 ZSWIM8A7E2V4 1837 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 SLC15A5A6NIM6 579 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 DEXIO95424 95 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 FUT2Q10981 343 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 NTRK3Q16288 839 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 FBXO46Q6PJ61 603 aaPredicted RBP19.26■□□□□ 0.67
USHBP1-210ENST00000600286 HEATR3Q7Z4Q2 680 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 DPP9Q86TI2 863 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 CCDC83Q8IWF9 413 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 SOCS4Q8WXH5 440 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 TMX3Q96JJ7 454 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 KIF3AQ9Y496 699 aa19.26■□□□□ 0.67
USHBP1-210ENST00000600286 hCG_1642624A0A1W2PR95 340 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 SCG2P13521 617 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 PTPREP23469 700 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 PFKFB3Q16875 520 aaPredicted RBP19.25■□□□□ 0.67
USHBP1-210ENST00000600286 SLC35G1Q2M3R5 365 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 SAMD3Q8N6K7 520 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 CUL5Q93034 780 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 SNX21Q969T3 373 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 GLT8D2Q9H1C3 349 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 RIPK3Q9Y572 518 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.25■□□□□ 0.67
USHBP1-210ENST00000600286 PFASO15067 1338 aa19.25■□□□□ 0.67
USHBP1-210ENST00000600286 LARGE1O95461 756 aa19.24■□□□□ 0.67
USHBP1-210ENST00000600286 RGS2P41220 211 aa19.24■□□□□ 0.67
USHBP1-210ENST00000600286 NAPAP54920 295 aa19.24■□□□□ 0.67
USHBP1-210ENST00000600286 HMGN5P82970 282 aaKnown RBP19.24■□□□□ 0.67
USHBP1-210ENST00000600286 NSMFQ6X4W1 530 aa19.24■□□□□ 0.67
USHBP1-210ENST00000600286 RGS22Q8NE09 1264 aa19.24■□□□□ 0.67
USHBP1-210ENST00000600286 MAP3K20Q9NYL2 800 aaKnown RBP19.24■□□□□ 0.67
USHBP1-210ENST00000600286 ORC3Q9UBD5 711 aaPredicted RBP19.24■□□□□ 0.67
USHBP1-210ENST00000600286 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
USHBP1-210ENST00000600286 PDE4DIPQ5VU43 2346 aa19.24■□□□□ 0.67
USHBP1-210ENST00000600286 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 SOX10P56693 466 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 PPP1R18Q6NYC8 613 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 OTOP1Q7RTM1 612 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 FAM184AQ8NB25 1140 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 CCDC148Q8NFR7 591 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 RAET1EQ8TD07 263 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 ARHGAP39Q9C0H5 1083 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 SRRDQ9UH36 339 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
USHBP1-210ENST00000600286 RLFQ13129 1914 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 B4DLN1 442 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 POTEB2H3BUK9 544 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 K7ELQ4 463 aaPredicted RBP19.22■□□□□ 0.67
USHBP1-210ENST00000600286 HSP90AA1P07900 732 aaKnown RBP19.22■□□□□ 0.67
USHBP1-210ENST00000600286 ADORA2AP29274 412 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 MRPL12P52815 198 aaKnown RBP19.22■□□□□ 0.67
USHBP1-210ENST00000600286 MAP2K5Q13163 448 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 BECN1Q14457 450 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 RNF207Q6ZRF8 634 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.22■□□□□ 0.67
USHBP1-210ENST00000600286 TEX2Q8IWB9 1127 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 TRMT44Q8IYL2 757 aaKnown RBP19.22■□□□□ 0.67
USHBP1-210ENST00000600286 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
USHBP1-210ENST00000600286 MPHOSPH6Q99547 160 aaKnown RBP19.22■□□□□ 0.67
USHBP1-210ENST00000600286 BARHL2Q9NY43 387 aa19.22■□□□□ 0.67
USHBP1-210ENST00000600286 GCOM1H8Y6P7 765 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-210ENST00000600286 PPP1R11O60927 126 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-210ENST00000600286 PPFIA3O75145 1194 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 CD2BP2O95400 341 aaKnown RBP19.21■□□□□ 0.67
USHBP1-210ENST00000600286 CFBP00751 764 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 POLR2MP0CAP2 368 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 GNA11P29992 359 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 TRIM29Q14134 588 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 GRB14Q14449 540 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 MUM1L1Q5H9M0 696 aa19.21■□□□□ 0.67
USHBP1-210ENST00000600286 NSUN7Q8NE18 718 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms