RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.29■■□□□ 1.16
FARP1-229ENST00000600190 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
FARP1-229ENST00000600190 SOWAHBA6NEL2 793 aa22.29■■□□□ 1.16
FARP1-229ENST00000600190 RANBP6O60518 1105 aaKnown RBP22.29■■□□□ 1.16
FARP1-229ENST00000600190 BEX3Q00994 111 aa22.29■■□□□ 1.16
FARP1-229ENST00000600190 TKFCQ3LXA3 575 aa22.29■■□□□ 1.16
FARP1-229ENST00000600190 RCSD1Q6JBY9 416 aa22.29■■□□□ 1.16
FARP1-229ENST00000600190 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.29■■□□□ 1.161e-6■■■□□ 14.6
FARP1-229ENST00000600190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.29■■□□□ 1.16
FARP1-229ENST00000600190 ASB14A6NK59 587 aa22.28■■□□□ 1.16
FARP1-229ENST00000600190 FOXP2O15409 715 aa22.28■■□□□ 1.16
FARP1-229ENST00000600190 PDE1AP54750 535 aa22.28■■□□□ 1.16
FARP1-229ENST00000600190 CENPQQ7L2Z9 268 aaPredicted RBP22.28■■□□□ 1.16
FARP1-229ENST00000600190 RASGRP2Q7LDG7 609 aa22.28■■□□□ 1.16
FARP1-229ENST00000600190 PRR12Q9ULL5 1215 aa22.28■■□□□ 1.16
FARP1-229ENST00000600190 DDX49Q9Y6V7 483 aaKnown RBP22.28■■□□□ 1.16
FARP1-229ENST00000600190 TMEM265A0A087WTH1 108 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 CTAGE5O15320 804 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 TLR3O15455 904 aaKnown RBP22.27■■□□□ 1.16
FARP1-229ENST00000600190 PLA2G6O60733 806 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 DNAJB2P25686 324 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 PPIGQ13427 754 aaKnown RBP eCLIP22.27■■□□□ 1.161e-13■■■□□ 15.2
FARP1-229ENST00000600190 MUM1L1Q5H9M0 696 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 VPS53Q5VIR6 699 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 FAM126BQ8IXS8 530 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 TMEM199Q8N511 208 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 PPP1R12CQ9BZL4 782 aa22.27■■□□□ 1.16
FARP1-229ENST00000600190 CSF2RAP15509 400 aa22.26■■□□□ 1.15
FARP1-229ENST00000600190 GRIN2CQ14957 1233 aa22.26■■□□□ 1.15
FARP1-229ENST00000600190 CXCL17Q6UXB2 119 aa22.26■■□□□ 1.15
FARP1-229ENST00000600190 C16orf59Q7L2K0 433 aa22.26■■□□□ 1.15
FARP1-229ENST00000600190 EEPD1Q7L9B9 569 aa22.26■■□□□ 1.15
FARP1-229ENST00000600190 TRIM6-TRIM34B2RNG4 842 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 ACRP10323 421 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 NKX3-2P78367 333 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 CCDC96Q2M329 555 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 TLK2Q86UE8 772 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 EVI5LQ96CN4 794 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 AP5M1Q9H0R1 490 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 TOMM22Q9NS69 142 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 CYP39A1Q9NYL5 469 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 CCPG1Q9ULG6 757 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 GNEQ9Y223 722 aaKnown RBP22.25■■□□□ 1.15
FARP1-229ENST00000600190 SPTBN5Q9NRC6 3674 aaKnown RBP22.25■■□□□ 1.15
FARP1-229ENST00000600190 ASTN1O14525 1302 aa22.25■■□□□ 1.15
FARP1-229ENST00000600190 DYNC1LI2O43237 492 aaPredicted RBP22.24■■□□□ 1.15
FARP1-229ENST00000600190 SMPD1P17405 629 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 PTGS1P23219 599 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 FSCN1Q16658 493 aaKnown RBP22.24■■□□□ 1.15
FARP1-229ENST00000600190 TMEM240Q5SV17 173 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 TIFAQ96CG3 184 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 PURBQ96QR8 312 aaKnown RBP22.24■■□□□ 1.15
FARP1-229ENST00000600190 ZNF576Q9H609 170 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 PDGFCQ9NRA1 345 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 ANAPC4Q9UJX5 808 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 SALL3Q9BXA9 1300 aa22.24■■□□□ 1.15
FARP1-229ENST00000600190 CYP2C18P33260 490 aa22.23■■□□□ 1.15
FARP1-229ENST00000600190 RRP12Q5JTH9 1297 aaKnown RBP22.23■■□□□ 1.15
FARP1-229ENST00000600190 FBXO16Q8IX29 292 aaPredicted RBP22.23■■□□□ 1.15
FARP1-229ENST00000600190 GRXCR1A8MXD5 290 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 ZEB2O60315 1214 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 CABYRO75952 493 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 CD4P01730 458 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 ICAM1P05362 532 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 SLC16A2P36021 539 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 ITGA7Q13683 1181 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 IQSEC1Q6DN90 963 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 TTBK2Q6IQ55 1244 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 TAPT1Q6NXT6 567 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 ZNF365Q70YC5 407 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 PLEKHM2Q8IWE5 1019 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 DCAF4Q8WV16 495 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 RILPL2Q969X0 211 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 OSBPL3Q9H4L5 887 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 HELLSQ9NRZ9 838 aa22.22■■□□□ 1.15
FARP1-229ENST00000600190 ORC4O43929 436 aa22.21■■□□□ 1.15
FARP1-229ENST00000600190 PBX2P40425 430 aa22.21■■□□□ 1.15
FARP1-229ENST00000600190 TMEM63BQ5T3F8 832 aa22.21■■□□□ 1.15
FARP1-229ENST00000600190 PSRC1Q6PGN9 363 aaPredicted RBP22.21■■□□□ 1.15
FARP1-229ENST00000600190 KIAA1211Q6ZU35 1233 aa22.21■■□□□ 1.15
FARP1-229ENST00000600190 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
FARP1-229ENST00000600190 FGAP02671 866 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 NOVP48745 357 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 BAATQ14032 418 aaPredicted RBP22.2■■□□□ 1.14
FARP1-229ENST00000600190 ALX1Q15699 326 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 SLC43A3Q8NBI5 491 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 FAM227BQ96M60 508 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 PBX4Q9BYU1 374 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 RANBP17Q9H2T7 1088 aaKnown RBP22.2■■□□□ 1.14
FARP1-229ENST00000600190 HIPK3Q9H422 1215 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 GPCPD1Q9NPB8 672 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 IL23AQ9NPF7 189 aa22.2■■□□□ 1.14
FARP1-229ENST00000600190 FRMPD2Q68DX3 1309 aaPredicted RBP22.2■■□□□ 1.14
FARP1-229ENST00000600190 FGRP09769 529 aa22.19■■□□□ 1.14
FARP1-229ENST00000600190 PSMC6P62333 389 aa22.19■■□□□ 1.14
FARP1-229ENST00000600190 MCMDC2Q4G0Z9 681 aa22.19■■□□□ 1.14
FARP1-229ENST00000600190 RASIP1Q5U651 963 aa22.19■■□□□ 1.14
FARP1-229ENST00000600190 SYDE2Q5VT97 1194 aa22.19■■□□□ 1.14
FARP1-229ENST00000600190 TICAM2Q86XR7 235 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms