RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
VRK3-218ENST00000600031 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
VRK3-218ENST00000600031 MRVI1Q9Y6F6 885 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 USH1GQ495M9 461 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 SASS6Q6UVJ0 657 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 RANBP17Q9H2T7 1088 aaKnown RBP17.29■□□□□ 0.36
VRK3-218ENST00000600031 GOLPH3LQ9H4A5 285 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 RRAGCQ9HB90 399 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 NF2P35240 595 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 UBE2SQ16763 222 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 INF2Q27J81 1249 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 KRT25Q7Z3Z0 450 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 PSTPIP2Q9H939 334 aa17.29■□□□□ 0.36
VRK3-218ENST00000600031 A0A1W2PQ27 194 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 A0A1W2PQ64 194 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 A0A1W2PQD8 194 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 NR1I2O75469 434 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 CCDC192P0DO97 292 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 IREB2P48200 963 aaKnown RBP17.28■□□□□ 0.36
VRK3-218ENST00000600031 CLK2P49760 499 aaKnown RBP17.28■□□□□ 0.36
VRK3-218ENST00000600031 HMGCS2P54868 508 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 MAP1SQ66K74 1059 aaPredicted RBP17.28■□□□□ 0.36
VRK3-218ENST00000600031 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 JMYQ8N9B5 988 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 CUL5Q93034 780 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 CLIC6Q96NY7 704 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
VRK3-218ENST00000600031 CEP131Q9UPN4 1083 aa17.28■□□□□ 0.36
VRK3-218ENST00000600031 MRPL12P52815 198 aaKnown RBP17.27■□□□□ 0.36
VRK3-218ENST00000600031 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
VRK3-218ENST00000600031 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
VRK3-218ENST00000600031 DACT1Q9NYF0 836 aa17.27■□□□□ 0.36
VRK3-218ENST00000600031 CSADQ9Y600 493 aa17.27■□□□□ 0.36
VRK3-218ENST00000600031 C19orf81C9J6K1 198 aa17.27■□□□□ 0.35
VRK3-218ENST00000600031 TPM3P06753 285 aa17.27■□□□□ 0.35
VRK3-218ENST00000600031 GRIN1Q05586 938 aa17.27■□□□□ 0.35
VRK3-218ENST00000600031 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.35
VRK3-218ENST00000600031 PRPF38AQ8NAV1 312 aaKnown RBP17.27■□□□□ 0.35
VRK3-218ENST00000600031 C12orf42Q96LP6 360 aa17.27■□□□□ 0.35
VRK3-218ENST00000600031 MAP7D2Q96T17 732 aa17.27■□□□□ 0.35
VRK3-218ENST00000600031 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.35
VRK3-218ENST00000600031 FBXO2Q9UK22 296 aaPredicted RBP17.27■□□□□ 0.35
VRK3-218ENST00000600031 UQCRHLA0A096LP55 91 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 A0A1B0GVL5 298 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 DYNC1I1O14576 645 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 UQCRHP07919 91 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 PTPREP23469 700 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 MCM7P33993 719 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 FMR1Q06787 632 aaKnown RBP eCLIP17.26■□□□□ 0.35
VRK3-218ENST00000600031 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
VRK3-218ENST00000600031 KRI1Q8N9T8 703 aaKnown RBP17.26■□□□□ 0.35
VRK3-218ENST00000600031 MRPS27Q92552 414 aaKnown RBP17.26■□□□□ 0.35
VRK3-218ENST00000600031 CLMNQ96JQ2 1002 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 TRAF5O00463 557 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 OPLAHO14841 1288 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 CUTAO60888 179 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 FLOT1O75955 427 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 PTGDRQ13258 359 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 USP17L6PQ6QN14 398 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 SHC4Q6S5L8 630 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 ENGASEQ8NFI3 743 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 TBCKQ8TEA7 893 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
VRK3-218ENST00000600031 MEIS2O14770 477 aa17.25■□□□□ 0.35
VRK3-218ENST00000600031 CMA1P23946 247 aa17.25■□□□□ 0.35
VRK3-218ENST00000600031 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
VRK3-218ENST00000600031 ANKRD13AQ8IZ07 590 aa17.25■□□□□ 0.35
VRK3-218ENST00000600031 PPP1R9AQ9ULJ8 1098 aa17.25■□□□□ 0.35
VRK3-218ENST00000600031 SRPRBQ9Y5M8 271 aaKnown RBP17.25■□□□□ 0.35
VRK3-218ENST00000600031 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
VRK3-218ENST00000600031 EDIL3O43854 480 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 BMP15O95972 392 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 NDUFA8P51970 172 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 ATP2C1P98194 919 aaPredicted RBP17.24■□□□□ 0.35
VRK3-218ENST00000600031 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 C4orf32Q8N8J7 132 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 GLT8D2Q9H1C3 349 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 NUP62CLQ9H1M0 184 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 ZNF536O15090 1300 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 LETM2Q2VYF4 491 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 SH3D19Q5HYK7 790 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 NEK8Q86SG6 692 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 LDHDQ86WU2 507 aa17.24■□□□□ 0.35
VRK3-218ENST00000600031 P2RX7Q99572 595 aaKnown RBP17.24■□□□□ 0.35
VRK3-218ENST00000600031 FAM160A1Q05DH4 1040 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms