RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 PTPDC1A2A3K4 754 aa21.94■■□□□ 1.1
COPE-209ENST00000599964 HSPA1AP0DMV8 641 aaKnown RBP21.94■■□□□ 1.1
COPE-209ENST00000599964 HSPA1BP0DMV9 641 aaKnown RBP21.94■■□□□ 1.1
COPE-209ENST00000599964 FCGRTP55899 365 aa21.94■■□□□ 1.1
COPE-209ENST00000599964 MAF1Q9H063 256 aa21.94■■□□□ 1.1
COPE-209ENST00000599964 PORCNQ9H237 461 aa21.94■■□□□ 1.1
COPE-209ENST00000599964 TSKSQ9UJT2 592 aa21.94■■□□□ 1.1
COPE-209ENST00000599964 KIF3AQ9Y496 699 aa21.94■■□□□ 1.1
COPE-209ENST00000599964 TNPO2O14787 897 aaKnown RBP21.93■■□□□ 1.1
COPE-209ENST00000599964 STRNO43815 780 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 PPP1R11O60927 126 aaPredicted RBP21.93■■□□□ 1.1
COPE-209ENST00000599964 CTDNEP1O95476 244 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 XBP1P17861 261 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 CTCFP49711 727 aaPredicted RBP21.93■■□□□ 1.1
COPE-209ENST00000599964 ST3GAL1Q11201 340 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 KCTD2Q14681 263 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 PPP1R18Q6NYC8 613 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 MCF2L2Q86YR7 1114 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 ZNF296Q8WUU4 475 aaPredicted RBP21.93■■□□□ 1.1
COPE-209ENST00000599964 COA7Q96BR5 231 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 EFCC1Q9HA90 598 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 RIPK3Q9Y572 518 aa21.93■■□□□ 1.1
COPE-209ENST00000599964 PPFIA3O75145 1194 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 HSP90AA1P07900 732 aaKnown RBP21.92■■□□□ 1.1
COPE-209ENST00000599964 FCER1AP12319 257 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 PSMC4P43686 418 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 NAPAP54920 295 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 CUL4AQ13619 759 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 PLEKHH3Q7Z736 793 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 FAM184AQ8NB25 1140 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 CCDC148Q8NFR7 591 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 BARHL2Q9NY43 387 aa21.92■■□□□ 1.1
COPE-209ENST00000599964 FOXN1O15353 648 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 GNRH1P01148 92 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 HOXD10P28358 340 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 ANP32AP39687 249 aaKnown RBP21.91■■□□□ 1.1
COPE-209ENST00000599964 PKN1Q16512 942 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 WWC2Q6AWC2 1192 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 GPR142Q7Z601 462 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 ABRAQ8N0Z2 381 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 FAM177A1Q8N128 213 aaPredicted RBP21.91■■□□□ 1.1
COPE-209ENST00000599964 SAMD3Q8N6K7 520 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 SMARCC2Q8TAQ2 1214 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 GPKOWQ92917 476 aaPredicted RBP eCLIP21.91■■□□□ 1.1
COPE-209ENST00000599964 DDX11Q96FC9 970 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 MMP19Q99542 508 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 SH3GLB2Q9NR46 395 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 SMC3Q9UQE7 1217 aa21.91■■□□□ 1.1
COPE-209ENST00000599964 PFASO15067 1338 aa21.9■■□□□ 1.1
COPE-209ENST00000599964 JAK2O60674 1132 aa21.9■■□□□ 1.1
COPE-209ENST00000599964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.9■■□□□ 1.1
COPE-209ENST00000599964 TEX2Q8IWB9 1127 aa21.9■■□□□ 1.1
COPE-209ENST00000599964 ANKRD35Q8N283 1001 aa21.9■■□□□ 1.1
COPE-209ENST00000599964 RGS22Q8NE09 1264 aa21.9■■□□□ 1.1
COPE-209ENST00000599964 CD99L2Q8TCZ2 262 aa21.9■■□□□ 1.1
COPE-209ENST00000599964 INTS4Q96HW7 963 aaKnown RBP21.9■■□□□ 1.1
COPE-209ENST00000599964 GLT8D2Q9H1C3 349 aa21.9■■□□□ 1.1
COPE-209ENST00000599964 SLC15A5A6NIM6 579 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 STXBP3O00186 592 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 HSPA8P11142 646 aaKnown RBP21.89■■□□□ 1.09
COPE-209ENST00000599964 PTPREP23469 700 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 TRIM29Q14134 588 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 MUM1L1Q5H9M0 696 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 NSMFQ6X4W1 530 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 SOCS4Q8WXH5 440 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 CLEC4DQ8WXI8 215 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 ALG1Q9BT22 464 aa21.89■■□□□ 1.09
COPE-209ENST00000599964 MAP3K20Q9NYL2 800 aaKnown RBP21.89■■□□□ 1.09
COPE-209ENST00000599964 MGAMO43451 1857 aa21.88■■□□□ 1.09
COPE-209ENST00000599964 ECM2O94769 699 aaPredicted RBP21.88■■□□□ 1.09
COPE-209ENST00000599964 MRPL12P52815 198 aaKnown RBP21.88■■□□□ 1.09
COPE-209ENST00000599964 CUL5Q93034 780 aa21.88■■□□□ 1.09
COPE-209ENST00000599964 TRIM47Q96LD4 638 aa21.88■■□□□ 1.09
COPE-209ENST00000599964 C6orf50Q9HD87 102 aa21.88■■□□□ 1.09
COPE-209ENST00000599964 SLC5A4Q9NY91 659 aa21.88■■□□□ 1.09
COPE-209ENST00000599964 NFIBO00712 420 aa21.87■■□□□ 1.09
COPE-209ENST00000599964 FDPSP14324 419 aaKnown RBP21.87■■□□□ 1.09
COPE-209ENST00000599964 TAL1P17542 331 aaPredicted RBP21.87■■□□□ 1.09
COPE-209ENST00000599964 GNA11P29992 359 aa21.87■■□□□ 1.09
COPE-209ENST00000599964 RNF207Q6ZRF8 634 aa21.87■■□□□ 1.09
COPE-209ENST00000599964 NUDT12Q9BQG2 462 aa21.87■■□□□ 1.09
COPE-209ENST00000599964 PSTPIP2Q9H939 334 aa21.87■■□□□ 1.09
COPE-209ENST00000599964 A1CFQ9NQ94 594 aaKnown RBP21.87■■□□□ 1.09
COPE-209ENST00000599964 PLXNB2O15031 1838 aa21.87■■□□□ 1.09
COPE-209ENST00000599964 RBBP6Q7Z6E9 1792 aaKnown RBP21.87■■□□□ 1.09
COPE-209ENST00000599964 ESYT2A0FGR8 921 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 SMCO2A6NFE2 343 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 GCOM1H8Y6P7 765 aaPredicted RBP21.86■■□□□ 1.09
COPE-209ENST00000599964 CFBP00751 764 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 POLR2MP0CAP2 368 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 CALML3P27482 149 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 ADCY7P51828 1080 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 LBX1P52954 281 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 NLRP5P59047 1200 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 GRB14Q14449 540 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 BICD2Q8TD16 824 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 VPS54Q9P1Q0 977 aa21.86■■□□□ 1.09
COPE-209ENST00000599964 GJB2P29033 226 aa21.85■■□□□ 1.09
COPE-209ENST00000599964 ADORA2AP29274 412 aa21.85■■□□□ 1.09
COPE-209ENST00000599964 PRMT2P55345 433 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms