RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 ACAD9Q9H845 621 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 A1CFQ9NQ94 594 aaKnown RBP14.71□□□□□ -0.05
HOMER3-211ENST00000599808 ZBTB40Q9NUA8 1239 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 MTMR4Q9NYA4 1195 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 SLC4A7Q9Y6M7 1214 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 ZNF536O15090 1300 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 TTLL1O95922 423 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 SMPD1P17405 629 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 PSMC6P62333 389 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 TMEM63BQ5T3F8 832 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 SLFN13Q68D06 897 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 ZNF444Q8N0Y2 327 aaPredicted RBP14.7□□□□□ -0.06
HOMER3-211ENST00000599808 OSBP2Q969R2 916 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 SCLYQ96I15 445 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 AGBL1Q96MI9 1066 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 EPB41L4AQ9HCS5 686 aaPredicted RBP14.7□□□□□ -0.06
HOMER3-211ENST00000599808 RNF146Q9NTX7 359 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 SYNPO2Q9UMS6 1093 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 PCDHA11Q9Y5I1 949 aa14.7□□□□□ -0.06
HOMER3-211ENST00000599808 ASB14A6NK59 587 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 TMEM232C9JQI7 657 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 DYNC1LI2O43237 492 aaPredicted RBP14.69□□□□□ -0.06
HOMER3-211ENST00000599808 FDX1P10109 184 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 BMP3P12645 472 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
HOMER3-211ENST00000599808 RPUSD2Q8IZ73 545 aaKnown RBP14.69□□□□□ -0.06
HOMER3-211ENST00000599808 FAM122AQ96E09 287 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 AP5M1Q9H0R1 490 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 PDGFCQ9NRA1 345 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 COG6Q9Y2V7 657 aa14.69□□□□□ -0.06
HOMER3-211ENST00000599808 TET1Q8NFU7 2136 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 ZBBXA8MT70 800 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 ZEB2O60315 1214 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 KCNQ1P51787 676 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 STAT2P52630 851 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 TAPT1Q6NXT6 567 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 FBXO16Q8IX29 292 aaPredicted RBP14.68□□□□□ -0.06
HOMER3-211ENST00000599808 SEZ6LQ9BYH1 1024 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 DDX19BQ9UMR2 479 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 PLIN4Q96Q06 1357 aa14.68□□□□□ -0.06
HOMER3-211ENST00000599808 BRWD1Q9NSI6 2320 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 RFXAPO00287 272 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 GPAA1O43292 621 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 SMARCA5O60264 1052 aaPredicted RBP14.67□□□□□ -0.06
HOMER3-211ENST00000599808 ALAS1P13196 640 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 ATP2A2P16615 1042 aaKnown RBP14.67□□□□□ -0.06
HOMER3-211ENST00000599808 TDO2P48775 406 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 TTLL4Q14679 1199 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 IQSEC1Q6DN90 963 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 EEPD1Q7L9B9 569 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 KBTBD3Q8NAB2 608 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 NEDD1Q8NHV4 660 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 APPBP2Q92624 585 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 CHMP4CQ96CF2 233 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 TRERF1Q96PN7 1200 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 C1QTNF1Q9BXJ1 281 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 ALDH8A1Q9H2A2 487 aaPredicted RBP14.67□□□□□ -0.06
HOMER3-211ENST00000599808 ZNF287Q9HBT7 754 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 ISY1Q9ULR0 285 aaKnown RBP14.67□□□□□ -0.06
HOMER3-211ENST00000599808 Q9Y3F1 56 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 SCN10AQ9Y5Y9 1956 aa14.67□□□□□ -0.06
HOMER3-211ENST00000599808 TRIP12Q14669 1992 aaPredicted RBP14.66□□□□□ -0.06
HOMER3-211ENST00000599808 TANC1Q9C0D5 1861 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 M0R2C6 588 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 ERC2O15083 957 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 CA3P07451 260 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 MS4A1P11836 297 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 POU3F3P20264 500 aaPredicted RBP14.66□□□□□ -0.06
HOMER3-211ENST00000599808 SKIV2LQ15477 1246 aaKnown RBP14.66□□□□□ -0.06
HOMER3-211ENST00000599808 AAK1Q2M2I8 961 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 TKFCQ3LXA3 575 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 MUM1L1Q5H9M0 696 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 FAM160B2Q86V87 743 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 CHURC1Q8WUH1 139 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 STAG1Q8WVM7 1258 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 LRRCC1Q9C099 1032 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 TRMT13Q9NUP7 481 aaKnown RBP14.66□□□□□ -0.06
HOMER3-211ENST00000599808 MTCH2Q9Y6C9 303 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 PTPRSQ13332 1948 aa14.66□□□□□ -0.06
HOMER3-211ENST00000599808 RNF113AO15541 343 aaKnown RBP14.65□□□□□ -0.06
HOMER3-211ENST00000599808 APPP05067 770 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 CYP2C9P11712 490 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 GNAT2P19087 354 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 MCCP23508 829 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 SLC1A4P43007 532 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 SNAP25P60880 206 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 IKQ13123 557 aaPredicted RBP14.65□□□□□ -0.06
HOMER3-211ENST00000599808 TMEM67Q5HYA8 995 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 KRT40Q6A162 431 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 KIAA1211Q6ZU35 1233 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 GMCL1Q96IK5 515 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 PURBQ96QR8 312 aaKnown RBP14.65□□□□□ -0.06
HOMER3-211ENST00000599808 CERS4Q9HA82 394 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 VTA1Q9NP79 307 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 ECHDC1Q9NTX5 307 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 CYP39A1Q9NYL5 469 aa14.65□□□□□ -0.06
HOMER3-211ENST00000599808 EPOPA6NHQ4 379 aa14.64□□□□□ -0.07
HOMER3-211ENST00000599808 PLA2G6O60733 806 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms