RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 TMEM199Q8N511 208 aa22.83■■□□□ 1.25
IRF3-222ENST00000599144 STAG1Q8WVM7 1258 aa22.83■■□□□ 1.25
IRF3-222ENST00000599144 NACAP1Q9BZK3 213 aa22.83■■□□□ 1.25
IRF3-222ENST00000599144 STX8Q9UNK0 236 aa22.83■■□□□ 1.25
IRF3-222ENST00000599144 DYNC1LI2O43237 492 aaPredicted RBP22.82■■□□□ 1.24
IRF3-222ENST00000599144 PSMC6P62333 389 aa22.82■■□□□ 1.24
IRF3-222ENST00000599144 ZMYM1Q5SVZ6 1142 aa22.82■■□□□ 1.24
IRF3-222ENST00000599144 RASIP1Q5U651 963 aa22.82■■□□□ 1.24
IRF3-222ENST00000599144 TLK2Q86UE8 772 aa22.82■■□□□ 1.24
IRF3-222ENST00000599144 IL17RBQ9NRM6 502 aa22.82■■□□□ 1.24
IRF3-222ENST00000599144 GNEQ9Y223 722 aaKnown RBP22.82■■□□□ 1.24
IRF3-222ENST00000599144 GRIN2DO15399 1336 aa22.82■■□□□ 1.24
IRF3-222ENST00000599144 TLR3O15455 904 aaKnown RBP22.81■■□□□ 1.24
IRF3-222ENST00000599144 CD4P01730 458 aa22.81■■□□□ 1.24
IRF3-222ENST00000599144 CCL23P55773 120 aa22.81■■□□□ 1.24
IRF3-222ENST00000599144 GMCL1Q96IK5 515 aa22.81■■□□□ 1.24
IRF3-222ENST00000599144 TRPV6Q9H1D0 765 aa22.81■■□□□ 1.24
IRF3-222ENST00000599144 PRR12Q9ULL5 1215 aa22.81■■□□□ 1.24
IRF3-222ENST00000599144 SYNPO2Q9UMS6 1093 aa22.81■■□□□ 1.24
IRF3-222ENST00000599144 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
IRF3-222ENST00000599144 PCDHB15Q9Y5E8 787 aa22.81■■□□□ 1.24
IRF3-222ENST00000599144 SPTBN5Q9NRC6 3674 aaKnown RBP22.8■■□□□ 1.24
IRF3-222ENST00000599144 FSCN1Q16658 493 aaKnown RBP22.8■■□□□ 1.24
IRF3-222ENST00000599144 VPS53Q5VIR6 699 aa22.8■■□□□ 1.24
IRF3-222ENST00000599144 NSMFQ6X4W1 530 aa22.8■■□□□ 1.24
IRF3-222ENST00000599144 FAM160B2Q86V87 743 aa22.8■■□□□ 1.24
IRF3-222ENST00000599144 CHURC1Q8WUH1 139 aa22.8■■□□□ 1.24
IRF3-222ENST00000599144 NKX2-4Q9H2Z4 354 aa22.8■■□□□ 1.24
IRF3-222ENST00000599144 TSPY2A6NKD2 308 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 SLC3A2P08195 630 aaKnown RBP22.79■■□□□ 1.24
IRF3-222ENST00000599144 ITGA7Q13683 1181 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 ADGRE1Q14246 886 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 CCDC85BQ15834 202 aaPredicted RBP22.79■■□□□ 1.24
IRF3-222ENST00000599144 TTBK2Q6IQ55 1244 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 TAPT1Q6NXT6 567 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 PPP1R13LQ8WUF5 828 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 HIPK3Q9H422 1215 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 IL23AQ9NPF7 189 aa22.79■■□□□ 1.24
IRF3-222ENST00000599144 YBX2Q9Y2T7 364 aaKnown RBP22.79■■□□□ 1.24
IRF3-222ENST00000599144 PRUNE2Q8WUY3 3088 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 ASB14A6NK59 587 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 SLC16A2P36021 539 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 NKX3-2P78367 333 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 CCDC96Q2M329 555 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 RCSD1Q6JBY9 416 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 PSRC1Q6PGN9 363 aaPredicted RBP22.78■■□□□ 1.24
IRF3-222ENST00000599144 OTOP2Q7RTS6 562 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 SLC43A3Q8NBI5 491 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 AP5M1Q9H0R1 490 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 CYP39A1Q9NYL5 469 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 MYH4Q9Y623 1939 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 TTC41PQ6P2S7 1318 aa22.78■■□□□ 1.24
IRF3-222ENST00000599144 WNT8AQ9H1J5 351 aa22.77■■□□□ 1.24
IRF3-222ENST00000599144 CCPG1Q9ULG6 757 aa22.77■■□□□ 1.24
IRF3-222ENST00000599144 MCM3APO60318 1980 aa22.77■■□□□ 1.24
IRF3-222ENST00000599144 B4GALT4O60513 344 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 RANBP6O60518 1105 aaKnown RBP22.76■■□□□ 1.23
IRF3-222ENST00000599144 FGBP02675 491 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 FDX1P10109 184 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 IGFBP4P22692 258 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 RABGGTBP53611 331 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 LRRFIP1Q32MZ4 808 aaKnown RBP22.76■■□□□ 1.23
IRF3-222ENST00000599144 TKFCQ3LXA3 575 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 TJAP1Q5JTD0 557 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 HERVK_113Q902F9 699 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 SCLYQ96I15 445 aa22.76■■□□□ 1.23
IRF3-222ENST00000599144 GAS2L1Q99501 681 aaPredicted RBP22.76■■□□□ 1.23
IRF3-222ENST00000599144 ERC2O15083 957 aa22.75■■□□□ 1.23
IRF3-222ENST00000599144 MYOGP15173 224 aa22.75■■□□□ 1.23
IRF3-222ENST00000599144 KIAA1211Q6ZU35 1233 aa22.75■■□□□ 1.23
IRF3-222ENST00000599144 NOC4LQ9BVI4 516 aaKnown RBP22.75■■□□□ 1.23
IRF3-222ENST00000599144 FRMPD2Q68DX3 1309 aaPredicted RBP22.75■■□□□ 1.23
IRF3-222ENST00000599144 RBAK-RBAKDNI3L0D1 243 aa22.74■■□□□ 1.23
IRF3-222ENST00000599144 NFIBO00712 420 aa22.74■■□□□ 1.23
IRF3-222ENST00000599144 MX1P20591 662 aa22.74■■□□□ 1.23
IRF3-222ENST00000599144 BAATQ14032 418 aaPredicted RBP22.74■■□□□ 1.23
IRF3-222ENST00000599144 VWCEQ96DN2 955 aa22.74■■□□□ 1.23
IRF3-222ENST00000599144 GPCPD1Q9NPB8 672 aa22.74■■□□□ 1.23
IRF3-222ENST00000599144 MSRAQ9UJ68 235 aa22.74■■□□□ 1.23
IRF3-222ENST00000599144 CYP2C9P11712 490 aa22.73■■□□□ 1.23
IRF3-222ENST00000599144 RRP12Q5JTH9 1297 aaKnown RBP22.73■■□□□ 1.23
IRF3-222ENST00000599144 SYMPKQ92797 1274 aaKnown RBP22.73■■□□□ 1.23
IRF3-222ENST00000599144 TOMM22Q9NS69 142 aa22.73■■□□□ 1.23
IRF3-222ENST00000599144 TRMT13Q9NUP7 481 aaKnown RBP22.73■■□□□ 1.23
IRF3-222ENST00000599144 LRRC37A2A6NM11 1700 aa22.72■■□□□ 1.23
IRF3-222ENST00000599144 PLA2G6O60733 806 aa22.72■■□□□ 1.23
IRF3-222ENST00000599144 CABYRO75952 493 aa22.72■■□□□ 1.23
IRF3-222ENST00000599144 ICAM1P05362 532 aa22.72■■□□□ 1.23
IRF3-222ENST00000599144 IQSEC1Q6DN90 963 aa22.72■■□□□ 1.23
IRF3-222ENST00000599144 SLC30A10Q6XR72 485 aa22.72■■□□□ 1.23
IRF3-222ENST00000599144 ZBBXA8MT70 800 aa22.71■■□□□ 1.23
IRF3-222ENST00000599144 ZEB2O60315 1214 aa22.71■■□□□ 1.23
IRF3-222ENST00000599144 MYL3P08590 195 aa22.71■■□□□ 1.23
IRF3-222ENST00000599144 RAB30Q15771 203 aa22.71■■□□□ 1.23
IRF3-222ENST00000599144 RANBP17Q9H2T7 1088 aaKnown RBP22.71■■□□□ 1.23
IRF3-222ENST00000599144 PTPDC1A2A3K4 754 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 CALML3P27482 149 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 ALDH5A1P51649 535 aaPredicted RBP22.7■■□□□ 1.22
IRF3-222ENST00000599144 SYDE2Q5VT97 1194 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 MICALL1Q8N3F8 863 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms