RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
LIG1-214ENST00000597146 TRIOO75962 3097 aa18.6■□□□□ 0.57
LIG1-214ENST00000597146 ATP2A1O14983 1001 aa18.6■□□□□ 0.57
LIG1-214ENST00000597146 DYNC1LI2O43237 492 aaPredicted RBP18.6■□□□□ 0.57
LIG1-214ENST00000597146 MBD4O95243 580 aa18.6■□□□□ 0.57
LIG1-214ENST00000597146 SSTR3P32745 418 aaPredicted RBP18.6■□□□□ 0.57
LIG1-214ENST00000597146 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
LIG1-214ENST00000597146 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
LIG1-214ENST00000597146 FBXL18Q96ME1 805 aa18.6■□□□□ 0.57
LIG1-214ENST00000597146 AP5M1Q9H0R1 490 aa18.6■□□□□ 0.57
LIG1-214ENST00000597146 SCN10AQ9Y5Y9 1956 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 TNKSO95271 1327 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 LCHNA4D1U4 455 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 USP17L12C9JPN9 530 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 USP17L21D6R901 530 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 ZBED4O75132 1171 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 NDUFB10O96000 172 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 ACTN1P12814 892 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 IL9P15248 144 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 TTF1Q15361 905 aaPredicted RBP18.59■□□□□ 0.57
LIG1-214ENST00000597146 ZKSCAN2Q63HK3 967 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 PRPF38AQ8NAV1 312 aaKnown RBP18.59■□□□□ 0.57
LIG1-214ENST00000597146 UBE2ZQ9H832 354 aaPredicted RBP18.59■□□□□ 0.57
LIG1-214ENST00000597146 PDGFCQ9NRA1 345 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 FBXO40Q9UH90 709 aa18.59■□□□□ 0.57
LIG1-214ENST00000597146 CTDP1Q9Y5B0 961 aaPredicted RBP18.59■□□□□ 0.57
LIG1-214ENST00000597146 USP34Q70CQ2 3546 aa18.58■□□□□ 0.57
LIG1-214ENST00000597146 SOWAHBA6NEL2 793 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 F5H6K3 240 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 GOLIM4O00461 696 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 KLRC3Q07444 240 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 CSPP1Q1MSJ5 1256 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 EEPD1Q7L9B9 569 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 TMCO2Q7Z6W1 182 aaPredicted RBP18.58■□□□□ 0.56
LIG1-214ENST00000597146 FBXO16Q8IX29 292 aaPredicted RBP18.58■□□□□ 0.56
LIG1-214ENST00000597146 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 FAM133AQ8N9E0 248 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 CHST13Q8NET6 341 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 PHOSPHO2Q8TCD6 241 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 PPP1R13LQ8WUF5 828 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 DNAJC2Q99543 621 aaKnown RBP18.58■□□□□ 0.56
LIG1-214ENST00000597146 SEZ6LQ9BYH1 1024 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 SLC38A10Q9HBR0 1119 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 ATP8A2Q9NTI2 1148 aa18.58■□□□□ 0.56
LIG1-214ENST00000597146 ZEB2O60315 1214 aa18.57■□□□□ 0.56
LIG1-214ENST00000597146 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
LIG1-214ENST00000597146 MTUS1Q9ULD2 1270 aa18.57■□□□□ 0.56
LIG1-214ENST00000597146 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
LIG1-214ENST00000597146 KIF28PB7ZC32 967 aa18.56■□□□□ 0.56
LIG1-214ENST00000597146 CHGBP05060 677 aa18.56■□□□□ 0.56
LIG1-214ENST00000597146 KCNA5P22460 613 aa18.56■□□□□ 0.56
LIG1-214ENST00000597146 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
LIG1-214ENST00000597146 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.56■□□□□ 0.56
LIG1-214ENST00000597146 ANKS1AQ92625 1134 aa18.56■□□□□ 0.56
LIG1-214ENST00000597146 A1CFQ9NQ94 594 aaKnown RBP18.56■□□□□ 0.56
LIG1-214ENST00000597146 EXOC6BQ9Y2D4 811 aa18.56■□□□□ 0.56
LIG1-214ENST00000597146 C5orf42Q9H799 3197 aa18.55■□□□□ 0.56
LIG1-214ENST00000597146 ALADP13716 330 aa18.55■□□□□ 0.56
LIG1-214ENST00000597146 LEXMQ3ZCV2 418 aa18.55■□□□□ 0.56
LIG1-214ENST00000597146 TAPT1Q6NXT6 567 aa18.55■□□□□ 0.56
LIG1-214ENST00000597146 FTOQ9C0B1 505 aaKnown RBP eCLIP18.55■□□□□ 0.56
LIG1-214ENST00000597146 ZNF536O15090 1300 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.54■□□□□ 0.56
LIG1-214ENST00000597146 RBAK-RBAKDNI3L0D1 243 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 SUPT20HL2P0C7V6 817 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 STK11IPQ8N1F8 1099 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.54■□□□□ 0.56
LIG1-214ENST00000597146 ACAD9Q9H845 621 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 IL1RAPL2Q9NP60 686 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 RNF146Q9NTX7 359 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 CFAP54Q96N23 3096 aa18.54■□□□□ 0.56
LIG1-214ENST00000597146 ASB14A6NK59 587 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 IQCF3P0C7M6 154 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 RASA1P20936 1047 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 RFC2P35250 354 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 PTCRAQ6ISU1 281 aaPredicted RBP18.53■□□□□ 0.56
LIG1-214ENST00000597146 PHOX2BQ99453 314 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 NYAP2Q9P242 653 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 COG6Q9Y2V7 657 aa18.53■□□□□ 0.56
LIG1-214ENST00000597146 DCXO43602 365 aa18.52■□□□□ 0.56
LIG1-214ENST00000597146 MYL3P08590 195 aa18.52■□□□□ 0.56
LIG1-214ENST00000597146 ADD2P35612 726 aa18.52■□□□□ 0.56
LIG1-214ENST00000597146 OAZ1P54368 228 aa18.52■□□□□ 0.56
LIG1-214ENST00000597146 PURAQ00577 322 aaKnown RBP18.52■□□□□ 0.56
LIG1-214ENST00000597146 FAM47CQ5HY64 1035 aa18.52■□□□□ 0.56
LIG1-214ENST00000597146 SUGCTQ9HAC7 445 aa18.52■□□□□ 0.56
LIG1-214ENST00000597146 SLC4A4Q9Y6R1 1079 aa18.52■□□□□ 0.56
LIG1-214ENST00000597146 ATG2AQ2TAZ0 1938 aa18.51■□□□□ 0.55
LIG1-214ENST00000597146 KCNJ6P48051 423 aa18.51■□□□□ 0.55
LIG1-214ENST00000597146 WDR5P61964 334 aaKnown RBP18.51■□□□□ 0.55
LIG1-214ENST00000597146 DEFB103AP81534 67 aa18.51■□□□□ 0.55
LIG1-214ENST00000597146 IQSEC1Q6DN90 963 aa18.51■□□□□ 0.55
LIG1-214ENST00000597146 LRRC47Q8N1G4 583 aaKnown RBP18.51■□□□□ 0.55
LIG1-214ENST00000597146 PURBQ96QR8 312 aaKnown RBP18.51■□□□□ 0.55
LIG1-214ENST00000597146 CLIP2Q9UDT6 1046 aa18.51■□□□□ 0.55
LIG1-214ENST00000597146 FEM1BQ9UK73 627 aa18.51■□□□□ 0.55
LIG1-214ENST00000597146 Q9Y3F1 56 aa18.51■□□□□ 0.55
LIG1-214ENST00000597146 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms