RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CMTR1Q8N1G2 835 aaKnown RBP16.66■□□□□ 0.26
LIG1-208ENST00000595758 ARMC5Q96C12 935 aa16.66■□□□□ 0.26
LIG1-208ENST00000595758 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
LIG1-208ENST00000595758 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
LIG1-208ENST00000595758 PNMA6FA0A0J9YX94 578 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 PGK2P07205 417 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 PDIA3P30101 505 aaKnown RBP16.65■□□□□ 0.26
LIG1-208ENST00000595758 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
LIG1-208ENST00000595758 NEK4P51957 841 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 CCDC82Q8N4S0 544 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 PIBF1Q8WXW3 757 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 RRP36Q96EU6 259 aaKnown RBP16.65■□□□□ 0.26
LIG1-208ENST00000595758 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
LIG1-208ENST00000595758 BACH2Q9BYV9 841 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 FAM217BQ9NTX9 383 aaPredicted RBP16.65■□□□□ 0.26
LIG1-208ENST00000595758 PLXNB2O15031 1838 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
LIG1-208ENST00000595758 ABCB11O95342 1321 aa16.65■□□□□ 0.26
LIG1-208ENST00000595758 TRAF1Q13077 416 aa16.64■□□□□ 0.25
LIG1-208ENST00000595758 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
LIG1-208ENST00000595758 CCL14Q16627 93 aa16.64■□□□□ 0.25
LIG1-208ENST00000595758 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
LIG1-208ENST00000595758 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
LIG1-208ENST00000595758 TRIB2Q92519 343 aa16.64■□□□□ 0.25
LIG1-208ENST00000595758 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
LIG1-208ENST00000595758 A1CFQ9NQ94 594 aaKnown RBP16.64■□□□□ 0.25
LIG1-208ENST00000595758 SEC63Q9UGP8 760 aaKnown RBP16.64■□□□□ 0.25
LIG1-208ENST00000595758 MRPL11Q9Y3B7 192 aaKnown RBP16.64■□□□□ 0.25
LIG1-208ENST00000595758 PCDHA1Q9Y5I3 950 aa16.64■□□□□ 0.25
LIG1-208ENST00000595758 DNAJC25-GNG10A0A024R161 153 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 POTEB2H3BUK9 544 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 NFIBO00712 420 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
LIG1-208ENST00000595758 HMGCRP04035 888 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 INHAP05111 366 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 CDC27P30260 824 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 ADD1P35611 737 aaKnown RBP16.63■□□□□ 0.25
LIG1-208ENST00000595758 UBXN2AP68543 259 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 ZNF792Q3KQV3 632 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 ZNF333Q96JL9 665 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 DIS3Q9Y2L1 958 aaKnown RBP16.63■□□□□ 0.25
LIG1-208ENST00000595758 PFASO15067 1338 aa16.63■□□□□ 0.25
LIG1-208ENST00000595758 SMCHD1A6NHR9 2005 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 AK2P54819 239 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 FUT2Q10981 343 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
LIG1-208ENST00000595758 MFSD14CQ5VZR4 134 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 MAML3Q96JK9 1138 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 KIF2CQ99661 725 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 CYP39A1Q9NYL5 469 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 FLRT1Q9NZU1 646 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 NID2Q14112 1375 aa16.62■□□□□ 0.25
LIG1-208ENST00000595758 ZNF236Q9UL36 1845 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 ZNFX1Q9P2E3 1918 aaKnown RBP16.61■□□□□ 0.25
LIG1-208ENST00000595758 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
LIG1-208ENST00000595758 CCT2P78371 535 aaKnown RBP16.61■□□□□ 0.25
LIG1-208ENST00000595758 CNTN2Q02246 1040 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 TRIM32Q13049 653 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 MCF2L2Q86YR7 1114 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 FAM133AQ8N9E0 248 aa16.61■□□□□ 0.25
LIG1-208ENST00000595758 NCOA5Q9HCD5 579 aaKnown RBP16.61■□□□□ 0.25
LIG1-208ENST00000595758 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
LIG1-208ENST00000595758 CCDC85CA6NKD9 419 aa16.6■□□□□ 0.25
LIG1-208ENST00000595758 STK3Q13188 491 aa16.6■□□□□ 0.25
LIG1-208ENST00000595758 TBC1D32Q96NH3 1257 aa16.6■□□□□ 0.25
LIG1-208ENST00000595758 MAF1Q9H063 256 aa16.6■□□□□ 0.25
LIG1-208ENST00000595758 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
LIG1-208ENST00000595758 CNTNAP5Q8WYK1 1306 aa16.6■□□□□ 0.25
LIG1-208ENST00000595758 IGHA2P01877 340 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
LIG1-208ENST00000595758 CALML3P27482 149 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 CYP2C19P33261 490 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 RPS6P62753 249 aaKnown RBP16.59■□□□□ 0.25
LIG1-208ENST00000595758 CACNB2Q08289 660 aaPredicted RBP16.59■□□□□ 0.25
LIG1-208ENST00000595758 RABEP1Q15276 862 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 MTFR1Q15390 333 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 SLC30A10Q6XR72 485 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 NOL8Q76FK4 1167 aaKnown RBP16.59■□□□□ 0.25
LIG1-208ENST00000595758 ZNF467Q7Z7K2 595 aaPredicted RBP16.59■□□□□ 0.25
LIG1-208ENST00000595758 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 TINF2Q9BSI4 451 aa16.59■□□□□ 0.25
LIG1-208ENST00000595758 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
LIG1-208ENST00000595758 MYH6P13533 1939 aa16.58■□□□□ 0.25
LIG1-208ENST00000595758 HTTP42858 3142 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 SOWAHBA6NEL2 793 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 CPLX1O14810 134 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 PFKFB2O60825 505 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 CCL5P13501 91 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 IFNAR1P17181 557 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 NTRK3Q16288 839 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
LIG1-208ENST00000595758 MSL3Q8N5Y2 521 aaKnown RBP16.58■□□□□ 0.24
LIG1-208ENST00000595758 FGD4Q96M96 766 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms