RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 NEDD4P46934 1319 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 ICAM1P05362 532 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 ASGR1P07306 291 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 MFAP1P55081 439 aaKnown RBP20.06■□□□□ 0.8
CCDC9-202ENST00000595659 BEX3Q00994 111 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 TNFAIP2Q03169 654 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 FAM161BQ96MY7 647 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 SPC25Q9HBM1 224 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 CYP39A1Q9NYL5 469 aa20.06■□□□□ 0.8
CCDC9-202ENST00000595659 SUPT16HQ9Y5B9 1047 aaKnown RBP20.06■□□□□ 0.8
CCDC9-202ENST00000595659 ZMYM6O95789 1325 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 MOXD2PA6NHM9 499 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 ASB14A6NK59 587 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 ZNF213O14771 459 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 PDHBP11177 359 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 RAG1P15918 1043 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 EPHB4P54760 987 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 GJA9P57773 515 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 FAAP100Q0VG06 881 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 BAATQ14032 418 aaPredicted RBP20.05■□□□□ 0.8
CCDC9-202ENST00000595659 TMEM63BQ5T3F8 832 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 BTNL9Q6UXG8 535 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 GLT1D1Q96MS3 346 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 UPF3AQ9H1J1 476 aaKnown RBP20.05■□□□□ 0.8
CCDC9-202ENST00000595659 PDGFCQ9NRA1 345 aa20.05■□□□□ 0.8
CCDC9-202ENST00000595659 SMCHD1A6NHR9 2005 aa20.04■□□□□ 0.8
CCDC9-202ENST00000595659 NFIBO00712 420 aa20.04■□□□□ 0.8
CCDC9-202ENST00000595659 FBXO16Q8IX29 292 aaPredicted RBP20.04■□□□□ 0.8
CCDC9-202ENST00000595659 PCSK9Q8NBP7 692 aaKnown RBP20.04■□□□□ 0.8
CCDC9-202ENST00000595659 CPVLQ9H3G5 476 aa20.04■□□□□ 0.8
CCDC9-202ENST00000595659 RNF41Q9H4P4 317 aaPredicted RBP20.04■□□□□ 0.8
CCDC9-202ENST00000595659 PLXNA1Q9UIW2 1896 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 KIAA0355O15063 1070 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 CTAGE5O15320 804 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 GOLGA8HP0CJ92 632 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 CST5P28325 142 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-202ENST00000595659 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
CCDC9-202ENST00000595659 ZNF543Q08ER8 600 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 ANKRD33Q7Z3H0 272 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 SLC17A8Q8NDX2 589 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 ESR2Q92731 530 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 TTC14Q96N46 770 aa20.03■□□□□ 0.8
CCDC9-202ENST00000595659 PTPDC1A2A3K4 754 aa20.02■□□□□ 0.8
CCDC9-202ENST00000595659 DYNC1LI2O43237 492 aaPredicted RBP20.02■□□□□ 0.8
CCDC9-202ENST00000595659 KDM4AO75164 1064 aa20.02■□□□□ 0.8
CCDC9-202ENST00000595659 SMPD1P17405 629 aa20.02■□□□□ 0.8
CCDC9-202ENST00000595659 TOX2Q96NM4 488 aa20.02■□□□□ 0.8
CCDC9-202ENST00000595659 UBA5Q9GZZ9 404 aa20.02■□□□□ 0.8
CCDC9-202ENST00000595659 ELP1O95163 1332 aa20.02■□□□□ 0.79
CCDC9-202ENST00000595659 B4E1Z4 1266 aa20.01■□□□□ 0.79
CCDC9-202ENST00000595659 PCP11498 1178 aaKnown RBP20.01■□□□□ 0.79
CCDC9-202ENST00000595659 CALML3P27482 149 aa20.01■□□□□ 0.79
CCDC9-202ENST00000595659 PDE4AP27815 886 aa20.01■□□□□ 0.79
CCDC9-202ENST00000595659 TAPT1Q6NXT6 567 aa20.01■□□□□ 0.79
CCDC9-202ENST00000595659 TLK2Q86UE8 772 aa20.01■□□□□ 0.79
CCDC9-202ENST00000595659 GNEQ9Y223 722 aaKnown RBP20.01■□□□□ 0.79
CCDC9-202ENST00000595659 ARVCFO00192 962 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 HIP1O00291 1037 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 SNHG28P0DPA3 235 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 CDK7P50613 346 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 CXCL17Q6UXB2 119 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 SLC30A10Q6XR72 485 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 KIAA1211Q6ZU35 1233 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 CLEC4DQ8WXI8 215 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 AP5M1Q9H0R1 490 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 IL25Q9H293 177 aa20■□□□□ 0.79
CCDC9-202ENST00000595659 A0A0U1RQG5 324 aaPredicted RBP19.99■□□□□ 0.79
CCDC9-202ENST00000595659 FPGSQ05932 587 aa19.99■□□□□ 0.79
CCDC9-202ENST00000595659 FSCN1Q16658 493 aaKnown RBP19.99■□□□□ 0.79
CCDC9-202ENST00000595659 TBX21Q9UL17 535 aa19.99■□□□□ 0.79
CCDC9-202ENST00000595659 STXBP5LQ9Y2K9 1186 aa19.99■□□□□ 0.79
CCDC9-202ENST00000595659 TIMP1P01033 207 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 ALDH5A1P51649 535 aaPredicted RBP19.98■□□□□ 0.79
CCDC9-202ENST00000595659 IMMTQ16891 758 aaKnown RBP19.98■□□□□ 0.79
CCDC9-202ENST00000595659 USH1GQ495M9 461 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 IQSEC1Q6DN90 963 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 RNF207Q6ZRF8 634 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 IQCA1Q86XH1 822 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 DGKHQ86XP1 1220 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 PNMA1Q8ND90 353 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 RNPC3Q96LT9 517 aaKnown RBP19.98■□□□□ 0.79
CCDC9-202ENST00000595659 GUCD1Q96NT3 240 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 DSCC1Q9BVC3 393 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 ZSWIM5Q9P217 1185 aa19.98■□□□□ 0.79
CCDC9-202ENST00000595659 LTBP2Q14767 1821 aa19.97■□□□□ 0.79
CCDC9-202ENST00000595659 GSPT1P15170 499 aaKnown RBP19.97■□□□□ 0.79
CCDC9-202ENST00000595659 RPS6P62753 249 aaKnown RBP19.97■□□□□ 0.79
CCDC9-202ENST00000595659 NKX3-2P78367 333 aa19.97■□□□□ 0.79
CCDC9-202ENST00000595659 ZNF697Q5TEC3 545 aa19.97■□□□□ 0.79
CCDC9-202ENST00000595659 FAM109BQ6ICB4 259 aaPredicted RBP19.97■□□□□ 0.79
CCDC9-202ENST00000595659 MORC4Q8TE76 937 aa19.97■□□□□ 0.79
CCDC9-202ENST00000595659 ZSCAN10Q96SZ4 725 aaPredicted RBP19.97■□□□□ 0.79
CCDC9-202ENST00000595659 PPP1R12CQ9BZL4 782 aa19.97■□□□□ 0.79
CCDC9-202ENST00000595659 KAT14Q9H8E8 782 aa19.97■□□□□ 0.79
CCDC9-202ENST00000595659 VTA1Q9NP79 307 aa19.97■□□□□ 0.79
CCDC9-202ENST00000595659 ADD3Q9UEY8 706 aaKnown RBP19.97■□□□□ 0.79
CCDC9-202ENST00000595659 COL6A3P12111 3177 aa19.96■□□□□ 0.79
CCDC9-202ENST00000595659 PSMC6P62333 389 aa19.96■□□□□ 0.79
CCDC9-202ENST00000595659 GPATCH4Q5T3I0 446 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms