RNA–Protein interactions for RNA: ENST00000595358.5

CCDC61-204, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC61, Length 1,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-204ENST00000595358 TRAF1Q13077 416 aa28.74■■■□□ 2.19
CCDC61-204ENST00000595358 KRBA2Q6ZNG9 492 aa28.74■■■□□ 2.19
CCDC61-204ENST00000595358 ZKSCAN4Q969J2 545 aaPredicted RBP28.74■■■□□ 2.19
CCDC61-204ENST00000595358 EPSTI1Q96J88 318 aa28.74■■■□□ 2.19
CCDC61-204ENST00000595358 WDR18Q9BV38 432 aa28.74■■■□□ 2.19
CCDC61-204ENST00000595358 WDR46O15213 610 aaKnown RBP28.73■■■□□ 2.19
CCDC61-204ENST00000595358 POLR2DO15514 142 aaKnown RBP28.73■■■□□ 2.19
CCDC61-204ENST00000595358 PRPHP41219 470 aa28.73■■■□□ 2.19
CCDC61-204ENST00000595358 USH1GQ495M9 461 aa28.73■■■□□ 2.19
CCDC61-204ENST00000595358 SYMPKQ92797 1274 aaKnown RBP28.73■■■□□ 2.19
CCDC61-204ENST00000595358 KIFC2Q96AC6 838 aa28.73■■■□□ 2.19
CCDC61-204ENST00000595358 DCPSQ96C86 337 aaKnown RBP28.73■■■□□ 2.19
CCDC61-204ENST00000595358 ZC3H4Q9UPT8 1303 aaKnown RBP28.73■■■□□ 2.19
CCDC61-204ENST00000595358 PHIPQ8WWQ0 1821 aa28.73■■■□□ 2.19
CCDC61-204ENST00000595358 EDIL3O43854 480 aa28.73■■■□□ 2.19
CCDC61-204ENST00000595358 PTPRAP18433 802 aa28.73■■■□□ 2.19
CCDC61-204ENST00000595358 LONP1P36776 959 aaKnown RBP28.73■■■□□ 2.19
CCDC61-204ENST00000595358 PICK1Q9NRD5 415 aa28.73■■■□□ 2.19
CCDC61-204ENST00000595358 MEIS2O14770 477 aa28.72■■■□□ 2.19
CCDC61-204ENST00000595358 CNNM3Q8NE01 707 aa28.72■■■□□ 2.19
CCDC61-204ENST00000595358 FZD1Q9UP38 647 aa28.72■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L15C9J2P7 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L13C9JLJ4 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L11C9JVI0 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L18D6R9N7 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L22D6RA61 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L17D6RBQ6 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L19D6RCP7 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L20D6RJB6 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 NEMFO60524 1076 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L24Q0WX57 530 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 UVSSAQ2YD98 709 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP17L6PQ6QN14 398 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 DTHD1Q6ZMT9 781 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 ERCC4Q92889 916 aaPredicted RBP28.71■■■□□ 2.19
CCDC61-204ENST00000595358 AS3MTQ9HBK9 375 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 FBXO28Q9NVF7 368 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 USP14P54578 494 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 MTMR2Q13614 643 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 ANO6Q4KMQ2 910 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 NOL9Q5SY16 702 aaKnown RBP28.71■■■□□ 2.19
CCDC61-204ENST00000595358 MCTP2Q6DN12 878 aa28.71■■■□□ 2.19
CCDC61-204ENST00000595358 GRIN3BO60391 1043 aa28.7■■■□□ 2.18
CCDC61-204ENST00000595358 AP3B2Q13367 1082 aa28.7■■■□□ 2.18
CCDC61-204ENST00000595358 USP50Q70EL3 339 aaPredicted RBP28.7■■■□□ 2.18
CCDC61-204ENST00000595358 TEX2Q8IWB9 1127 aa28.7■■■□□ 2.18
CCDC61-204ENST00000595358 SULF1Q8IWU6 871 aa28.7■■■□□ 2.18
CCDC61-204ENST00000595358 EMILIN3Q9NT22 766 aa28.7■■■□□ 2.18
CCDC61-204ENST00000595358 CAVIN2O95810 425 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 OR52Z1P0C646 297 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 SPP2Q13103 211 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 STX1AQ16623 288 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 ZNF280CQ8ND82 737 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 FAM200AQ8TCP9 573 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 A0A087X0B3 334 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 OPLAHO14841 1288 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 ACTN4O43707 911 aaKnown RBP28.69■■■□□ 2.18
CCDC61-204ENST00000595358 BACE1P56817 501 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 PPP4R3AQ6IN85 833 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 PDILTQ8N807 584 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.69■■■□□ 2.183e-6■■■□□ 16.1
CCDC61-204ENST00000595358 SERTAD1Q9UHV2 236 aa28.69■■■□□ 2.18
CCDC61-204ENST00000595358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.68■■■□□ 2.18
CCDC61-204ENST00000595358 GLTPD2A6NH11 291 aa28.68■■■□□ 2.18
CCDC61-204ENST00000595358 USP2O75604 605 aaPredicted RBP28.68■■■□□ 2.18
CCDC61-204ENST00000595358 MDM2Q00987 491 aaPredicted RBP28.68■■■□□ 2.18
CCDC61-204ENST00000595358 PRPF38AQ8NAV1 312 aaKnown RBP28.68■■■□□ 2.18
CCDC61-204ENST00000595358 TAL1P17542 331 aaPredicted RBP28.67■■■□□ 2.18
CCDC61-204ENST00000595358 KANK3Q6NY19 840 aa28.67■■■□□ 2.18
CCDC61-204ENST00000595358 CCDC174Q6PII3 467 aa28.67■■■□□ 2.18
CCDC61-204ENST00000595358 ANP32BQ92688 251 aaKnown RBP28.67■■■□□ 2.18
CCDC61-204ENST00000595358 ANO10Q9NW15 660 aa28.67■■■□□ 2.18
CCDC61-204ENST00000595358 HOOK1Q9UJC3 728 aaKnown RBP28.67■■■□□ 2.18
CCDC61-204ENST00000595358 TUBE1Q9UJT0 475 aa28.67■■■□□ 2.18
CCDC61-204ENST00000595358 SCN4AP35499 1836 aa28.67■■■□□ 2.18
CCDC61-204ENST00000595358 ADM5C9JUS6 153 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 PIK3CDO00329 1044 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 VCAM1P19320 739 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 EPHX2P34913 555 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 DGKZQ13574 1117 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 ZC3H15Q8WU90 426 aaKnown RBP28.66■■■□□ 2.18
CCDC61-204ENST00000595358 SLF1Q9BQI6 1058 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 ANO3Q9BYT9 981 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 DNAJC25Q9H1X3 360 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 TDP2O95551 362 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 FOSP01100 380 aaPredicted RBP28.66■■■□□ 2.18
CCDC61-204ENST00000595358 POTEDQ86YR6 584 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 MTMR9Q96QG7 549 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 PYM1Q9BRP8 204 aaKnown RBP28.66■■■□□ 2.18
CCDC61-204ENST00000595358 USP25Q9UHP3 1055 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 ZHX2Q9Y6X8 837 aa28.66■■■□□ 2.18
CCDC61-204ENST00000595358 GCFC2P16383 781 aaKnown RBP28.65■■■□□ 2.18
CCDC61-204ENST00000595358 USP11P51784 963 aa28.65■■■□□ 2.18
CCDC61-204ENST00000595358 PNOCQ13519 176 aa28.65■■■□□ 2.18
CCDC61-204ENST00000595358 KRT26Q7Z3Y9 468 aa28.65■■■□□ 2.18
CCDC61-204ENST00000595358 P2RX7Q99572 595 aaKnown RBP28.65■■■□□ 2.18
CCDC61-204ENST00000595358 NAP1L4Q99733 375 aaKnown RBP28.65■■■□□ 2.18
CCDC61-204ENST00000595358 PARP14Q460N5 1801 aa28.65■■■□□ 2.18
CCDC61-204ENST00000595358 PAPPA2Q9BXP8 1791 aa28.64■■■□□ 2.18
CCDC61-204ENST00000595358 SLC37A4O43826 429 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms