RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 GJD3Q8N144 294 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 AGBL1Q96MI9 1066 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 GRIN2DO15399 1336 aa15.22■□□□□ 0.03
SCAF1-202ENST00000595242 MYH4Q9Y623 1939 aa15.22■□□□□ 0.03
SCAF1-202ENST00000595242 GRB10Q13322 594 aa15.22■□□□□ 0.03
SCAF1-202ENST00000595242 FBXL18Q96ME1 805 aa15.22■□□□□ 0.03
SCAF1-202ENST00000595242 TEX13BQ9BXU2 312 aa15.22■□□□□ 0.03
SCAF1-202ENST00000595242 SWAP70Q9UH65 585 aa15.22■□□□□ 0.03
SCAF1-202ENST00000595242 RIPK3Q9Y572 518 aa15.22■□□□□ 0.03
SCAF1-202ENST00000595242 MAGEB6P1A0A0J9YX57 407 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 CABYRO75952 493 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 ARHGEF15O94989 841 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 PFKMP08237 780 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 CYP2D6P10635 497 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 ALADP13716 330 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 SNRNP48Q6IEG0 339 aaKnown RBP15.21■□□□□ 0.03
SCAF1-202ENST00000595242 TMED8Q6PL24 325 aaPredicted RBP15.21■□□□□ 0.03
SCAF1-202ENST00000595242 ARMCX2Q7L311 632 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 DEFB128Q7Z7B8 93 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 FAM178BQ8IXR5 827 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 DYNLL2Q96FJ2 89 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 SEZ6LQ9BYH1 1024 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 ANTXR1Q9H6X2 564 aa15.21■□□□□ 0.03
SCAF1-202ENST00000595242 DBNLQ9UJU6 430 aaKnown RBP15.21■□□□□ 0.03
SCAF1-202ENST00000595242 TANC1Q9C0D5 1861 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 CFAP54Q96N23 3096 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 SIP14410 1827 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 RAD21O60216 631 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 LPXNO60711 386 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 EEF2P13639 858 aaKnown RBP15.2■□□□□ 0.02
SCAF1-202ENST00000595242 SSTR3P32745 418 aaPredicted RBP15.2■□□□□ 0.02
SCAF1-202ENST00000595242 SLC4A3P48751 1232 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 TNFAIP2Q03169 654 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 OS9Q13438 667 aaPredicted RBP15.2■□□□□ 0.02
SCAF1-202ENST00000595242 FAM83BQ5T0W9 1011 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 NOL8Q76FK4 1167 aaKnown RBP15.2■□□□□ 0.02
SCAF1-202ENST00000595242 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 SLC9A7Q96T83 725 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 CRNKL1Q9BZJ0 848 aaKnown RBP15.2■□□□□ 0.02
SCAF1-202ENST00000595242 KATNBL1Q9H079 304 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 KCNH6Q9H252 994 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
SCAF1-202ENST00000595242 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
SCAF1-202ENST00000595242 ASTN1O14525 1302 aa15.19■□□□□ 0.02
SCAF1-202ENST00000595242 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-202ENST00000595242 ACTN1P12814 892 aa15.19■□□□□ 0.02
SCAF1-202ENST00000595242 FSCN1Q16658 493 aaKnown RBP15.19■□□□□ 0.02
SCAF1-202ENST00000595242 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
SCAF1-202ENST00000595242 PHOSPHO2Q8TCD6 241 aa15.19■□□□□ 0.02
SCAF1-202ENST00000595242 FGD4Q96M96 766 aa15.19■□□□□ 0.02
SCAF1-202ENST00000595242 DCP1AQ9NPI6 582 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-202ENST00000595242 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-202ENST00000595242 C5orf42Q9H799 3197 aa15.19■□□□□ 0.02
SCAF1-202ENST00000595242 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 PSMC6P62333 389 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 SPRED2Q7Z698 418 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 TLK2Q86UE8 772 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 HERC6Q8IVU3 1022 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 CPXCR1Q8N123 301 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 PI4K2BQ8TCG2 481 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 SNX21Q969T3 373 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 CCDC17Q96LX7 622 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
SCAF1-202ENST00000595242 CCDC8Q9H0W5 538 aaPredicted RBP15.18■□□□□ 0.02
SCAF1-202ENST00000595242 GNEQ9Y223 722 aaKnown RBP15.18■□□□□ 0.02
SCAF1-202ENST00000595242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-202ENST00000595242 EPB41L2O43491 1005 aaKnown RBP15.17■□□□□ 0.02
SCAF1-202ENST00000595242 ZEB2O60315 1214 aa15.17■□□□□ 0.02
SCAF1-202ENST00000595242 LEXMQ3ZCV2 418 aa15.17■□□□□ 0.02
SCAF1-202ENST00000595242 KIF2CQ99661 725 aa15.17■□□□□ 0.02
SCAF1-202ENST00000595242 AP5M1Q9H0R1 490 aa15.17■□□□□ 0.02
SCAF1-202ENST00000595242 ALDH8A1Q9H2A2 487 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-202ENST00000595242 UBE2ZQ9H832 354 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-202ENST00000595242 KANSL2Q9H9L4 492 aa15.17■□□□□ 0.02
SCAF1-202ENST00000595242 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
SCAF1-202ENST00000595242 LMCD1Q9NZU5 365 aa15.17■□□□□ 0.02
SCAF1-202ENST00000595242 GREB1LQ9C091 1923 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-202ENST00000595242 CYP2C9P11712 490 aa15.16■□□□□ 0.02
SCAF1-202ENST00000595242 IL9P15248 144 aa15.16■□□□□ 0.02
SCAF1-202ENST00000595242 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
SCAF1-202ENST00000595242 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.16■□□□□ 0.02
SCAF1-202ENST00000595242 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
SCAF1-202ENST00000595242 NUP88Q99567 741 aaPredicted RBP15.16■□□□□ 0.02
SCAF1-202ENST00000595242 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
SCAF1-202ENST00000595242 ATP2A1O14983 1001 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 DYNC1LI2O43237 492 aaPredicted RBP15.15■□□□□ 0.02
SCAF1-202ENST00000595242 REC8O95072 547 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 KCNA5P22460 613 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 PTGS1P23219 599 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 CDK8P49336 464 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 SLC9C2Q5TAH2 1124 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCAF1-202ENST00000595242 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
SCAF1-202ENST00000595242 GDPD5Q8WTR4 605 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms