RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 MTMR8Q96EF0 704 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 PIGSQ96S52 555 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.9■□□□□ 0.46
USE1-206ENST00000595101 SLC12A7Q9Y666 1083 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 ASTN1O14525 1302 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 RPTORQ8N122 1335 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 EPB41L2O43491 1005 aaKnown RBP17.89■□□□□ 0.45
USE1-206ENST00000595101 GJB1P08034 283 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 RPS6KB1P23443 525 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 TKFCQ3LXA3 575 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 OLFML2BQ68BL8 750 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 APOA5Q6Q788 366 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 TRMT44Q8IYL2 757 aaKnown RBP17.89■□□□□ 0.45
USE1-206ENST00000595101 CCDC82Q8N4S0 544 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 U2AF1L4Q8WU68 220 aaKnown RBP17.89■□□□□ 0.45
USE1-206ENST00000595101 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
USE1-206ENST00000595101 RIOX1Q9H6W3 641 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 HMX1Q9NP08 348 aaPredicted RBP17.89■□□□□ 0.45
USE1-206ENST00000595101 CYP39A1Q9NYL5 469 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 WDR19Q8NEZ3 1342 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 SOWAHBA6NEL2 793 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 APOBRQ0VD83 1088 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 MFSD14CQ5VZR4 134 aa17.89■□□□□ 0.45
USE1-206ENST00000595101 SRBD1Q8N5C6 995 aaKnown RBP17.89■□□□□ 0.45
USE1-206ENST00000595101 LARP6Q9BRS8 491 aaKnown RBP17.89■□□□□ 0.45
USE1-206ENST00000595101 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
USE1-206ENST00000595101 GJA8P48165 433 aa17.88■□□□□ 0.45
USE1-206ENST00000595101 BAATQ14032 418 aaPredicted RBP17.88■□□□□ 0.45
USE1-206ENST00000595101 SLC30A10Q6XR72 485 aa17.88■□□□□ 0.45
USE1-206ENST00000595101 FAM133AQ8N9E0 248 aa17.88■□□□□ 0.45
USE1-206ENST00000595101 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
USE1-206ENST00000595101 BRF1Q92994 677 aa17.88■□□□□ 0.45
USE1-206ENST00000595101 TINF2Q9BSI4 451 aa17.88■□□□□ 0.45
USE1-206ENST00000595101 SLC5A4Q9NY91 659 aa17.88■□□□□ 0.45
USE1-206ENST00000595101 ZNF236Q9UL36 1845 aa17.88■□□□□ 0.45
USE1-206ENST00000595101 KLF18A0A0U1RQI7 1052 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 hCG_1642624A0A1W2PR95 340 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 POTEB2H3BUK9 544 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 ZBTB5O15062 677 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 CYBAP13498 195 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 RGS19P49795 217 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 ANO1Q5XXA6 986 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 FBXO11Q86XK2 927 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 FANCBQ8NB91 859 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 MAP3K14Q99558 947 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 ZSWIM6Q9HCJ5 1215 aa17.87■□□□□ 0.45
USE1-206ENST00000595101 DIS3Q9Y2L1 958 aaKnown RBP17.87■□□□□ 0.45
USE1-206ENST00000595101 PTPDC1A2A3K4 754 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 OPLAHO14841 1288 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 SGPL1O95470 568 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 SNAI1O95863 264 aaPredicted RBP17.86■□□□□ 0.45
USE1-206ENST00000595101 PSMA5P28066 241 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 CNGA1P29973 690 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 RUFY3Q7L099 469 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 FAM217BQ9NTX9 383 aaPredicted RBP17.86■□□□□ 0.45
USE1-206ENST00000595101 BAZ2BQ9UIF8 2168 aaKnown RBP17.86■□□□□ 0.45
USE1-206ENST00000595101 TNRC18O15417 2968 aaPredicted RBP17.86■□□□□ 0.45
USE1-206ENST00000595101 ZNFX1Q9P2E3 1918 aaKnown RBP17.86■□□□□ 0.45
USE1-206ENST00000595101 CDC27P30260 824 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 FGD1P98174 961 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 LHX8Q68G74 356 aa17.86■□□□□ 0.45
USE1-206ENST00000595101 NAP1L2Q9ULW6 460 aaPredicted RBP17.86■□□□□ 0.45
USE1-206ENST00000595101 CALML3P27482 149 aa17.85■□□□□ 0.45
USE1-206ENST00000595101 KIF5BP33176 963 aa17.85■□□□□ 0.45
USE1-206ENST00000595101 RPS6P62753 249 aaKnown RBP17.85■□□□□ 0.45
USE1-206ENST00000595101 TOB2Q14106 344 aaPredicted RBP17.85■□□□□ 0.45
USE1-206ENST00000595101 AGXT2Q9BYV1 514 aa17.85■□□□□ 0.45
USE1-206ENST00000595101 ZBTB43O43298 467 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 TFRCP02786 760 aaKnown RBP17.84■□□□□ 0.45
USE1-206ENST00000595101 MAMDC4Q6UXC1 1216 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 RNF207Q6ZRF8 634 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 TMTC3Q6ZXV5 915 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 AMNQ9BXJ7 453 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 COL20A1Q9P218 1284 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 PCDHA1Q9Y5I3 950 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 PFASO15067 1338 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 PNMA6FA0A0J9YX94 578 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 ZNF865P0CJ78 1059 aaPredicted RBP17.84■□□□□ 0.45
USE1-206ENST00000595101 CALM1P0DP23 149 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 CALM2P0DP24 149 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 CALM3P0DP25 149 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 ADD1P35611 737 aaKnown RBP17.84■□□□□ 0.45
USE1-206ENST00000595101 SYNE3Q6ZMZ3 975 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 ARMCX2Q7L311 632 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 LENG1Q96BZ8 264 aaPredicted RBP17.84■□□□□ 0.45
USE1-206ENST00000595101 SPZ1Q9BXG8 430 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 CRISPLD2Q9H0B8 497 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 CYP46A1Q9Y6A2 500 aa17.84■□□□□ 0.45
USE1-206ENST00000595101 PPFIA3O75145 1194 aa17.83■□□□□ 0.44
USE1-206ENST00000595101 MNX1P50219 401 aaPredicted RBP17.83■□□□□ 0.44
USE1-206ENST00000595101 FUT2Q10981 343 aa17.83■□□□□ 0.44
USE1-206ENST00000595101 DNAH12Q6ZR08 3092 aa17.83■□□□□ 0.44
USE1-206ENST00000595101 DIS3LQ8TF46 1054 aaKnown RBP17.83■□□□□ 0.44
USE1-206ENST00000595101 TM6SF1Q9BZW5 370 aa17.83■□□□□ 0.44
USE1-206ENST00000595101 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.83■□□□□ 0.44
USE1-206ENST00000595101 ABCB11O95342 1321 aa17.83■□□□□ 0.44
USE1-206ENST00000595101 GOLGA8AA7E2F4 631 aa17.82■□□□□ 0.44
USE1-206ENST00000595101 GOLGA8BA8MQT2 603 aa17.82■□□□□ 0.44
USE1-206ENST00000595101 PTGS1P23219 599 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms