RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 REXO1L1PQ8IX06 675 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 C4orf32Q8N8J7 132 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 CCDC12Q8WUD4 166 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 CCDC34Q96HJ3 373 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 FANCLQ9NW38 375 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 SCN9AQ15858 1988 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 DDTLA6NHG4 134 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 RAD21O60216 631 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 FANCCQ00597 558 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 MORC3Q14149 939 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 SHROOM1Q2M3G4 852 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 CC2D1AQ6P1N0 951 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 DNAI1Q9UI46 699 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 PPIP5K2O43314 1243 aa19.21■□□□□ 0.67
SHKBP1-205ENST00000594973 ACTN2P35609 894 aa19.21■□□□□ 0.67
SHKBP1-205ENST00000594973 TMEM60Q9H2L4 133 aa19.21■□□□□ 0.67
SHKBP1-205ENST00000594973 DNAJC18Q9H819 358 aa19.21■□□□□ 0.67
SHKBP1-205ENST00000594973 C6orf50Q9HD87 102 aa19.21■□□□□ 0.67
SHKBP1-205ENST00000594973 FAM198AQ9UFP1 575 aa19.21■□□□□ 0.67
SHKBP1-205ENST00000594973 UTRNP46939 3433 aa19.21■□□□□ 0.67
SHKBP1-205ENST00000594973 ASPRV1Q53RT3 343 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 TRMT44Q8IYL2 757 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 GPR161Q8N6U8 529 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 NCAPGQ9BPX3 1015 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 RIOX1Q9H6W3 641 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 SASH3O75995 380 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 SERPINC1P01008 464 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 GNA11P29992 359 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 FMR1Q06787 632 aaKnown RBP eCLIP19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 ARL6IP4Q66PJ3 421 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 SPATA20Q8TB22 786 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 COA7Q96BR5 231 aa19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 MYCBPQ99417 103 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 BIN2Q9UBW5 565 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-205ENST00000594973 SFPQP23246 707 aaKnown RBP eCLIP19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 SMARCA1P28370 1054 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 MAGEA9P43362 315 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 DTHD1Q6ZMT9 781 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 TMC6Q7Z403 805 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 DEFB132Q7Z7B7 95 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 MLKLQ8NB16 471 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 TDRD3Q9H7E2 651 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 CCNT1O60563 726 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 RPS6KA5O75582 802 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 SNHG28P0DPA3 235 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 SLC16A2P36021 539 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 FKBP1AP62942 108 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 CCDC96Q2M329 555 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 JAKMIP3Q5VZ66 844 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 TTBK2Q6IQ55 1244 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 KCTD1Q719H9 257 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 SH3BP5LQ7L8J4 393 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 MRIQ9BWK5 157 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 BLZF1Q9H2G9 400 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 SERPINA10Q9UK55 444 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 ADAM21Q9UKJ8 722 aa19.19■□□□□ 0.66
SHKBP1-205ENST00000594973 YDJCA8MPS7 323 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 PP2D1A8MPX8 630 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 SEC31AO94979 1220 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 LONP1P36776 959 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 KARSQ15046 597 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 NONOQ15233 471 aaKnown RBP eCLIP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 E2F4Q16254 413 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 TRIML1Q8N9V2 468 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 EHD4Q9H223 541 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 DHX36Q9H2U1 1008 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 ARFGAP3Q9NP61 516 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 ZCCHC17Q9NP64 241 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 PI4KBQ9UBF8 816 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 DACH1Q9UI36 760 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 MYO3BQ8WXR4 1341 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 UBASH3AP57075 661 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 HDLBPQ00341 1268 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 ZNF543Q08ER8 600 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 DPYDQ12882 1025 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 SMYD4Q8IYR2 804 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 DPF2Q92785 391 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 SECISBP2LQ93073 1101 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 IDI2Q9BXS1 227 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 TMEM260Q9NX78 707 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 RGPD3A6NKT7 1758 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 RGPD4Q7Z3J3 1758 aa19.18■□□□□ 0.66
SHKBP1-205ENST00000594973 TXLNAP40222 546 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 PTPN21Q16825 1174 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 CFAP100Q494V2 611 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 CERKLQ49MI3 558 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 KLHL10Q6JEL2 608 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 ARMCX5Q6P1M9 558 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 ADGRF4Q8IZF3 695 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 REXO1Q8N1G1 1221 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 RASSF8Q8NHQ8 419 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 JRKLQ9Y4A0 524 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 NFE2L3Q9Y4A8 694 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 MYH8P13535 1937 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 TTC31Q49AM3 519 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 LEKR1Q6ZMV7 388 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 TBCKQ8TEA7 893 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms