RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 SPDYE5A6NIY4 337 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 FAM155AB1AL88 458 aaPredicted RBP16.81■□□□□ 0.28
CAPN12-202ENST00000593700 VCAM1P19320 739 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 SLC35G1Q2M3R5 365 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 FOXD4L6Q3SYB3 417 aaPredicted RBP16.81■□□□□ 0.28
CAPN12-202ENST00000593700 FOXD4L3Q6VB84 417 aaPredicted RBP16.81■□□□□ 0.28
CAPN12-202ENST00000593700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.81■□□□□ 0.28
CAPN12-202ENST00000593700 WNK4Q96J92 1243 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 SLF1Q9BQI6 1058 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 BEGAINQ9BUH8 593 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 AMNQ9BXJ7 453 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 ELP3Q9H9T3 547 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 GJB4Q9NTQ9 266 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 PRR12Q9ULL5 1215 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 PCDHA4Q9UN74 947 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 AFG3L2Q9Y4W6 797 aa16.81■□□□□ 0.28
CAPN12-202ENST00000593700 FIBPO43427 364 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 ADCY7P51828 1080 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 HMGCS2P54868 508 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 DNM1Q05193 864 aaKnown RBP16.8■□□□□ 0.28
CAPN12-202ENST00000593700 GRM1Q13255 1194 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 PPIL2Q13356 520 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 QRICH1Q2TAL8 776 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 RILPL1Q5EBL4 403 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 SH3D19Q5HYK7 790 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 MYSM1Q5VVJ2 828 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 FBXO11Q86XK2 927 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 BLIDQ8IZY5 108 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 PRPF38AQ8NAV1 312 aaKnown RBP16.8■□□□□ 0.28
CAPN12-202ENST00000593700 KIFC2Q96AC6 838 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 TMEM106CQ9BVX2 250 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 ZMYND12Q9H0C1 365 aa16.8■□□□□ 0.28
CAPN12-202ENST00000593700 MYPNQ86TC9 1320 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 MYH7BA7E2Y1 1941 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 FLOT1O75955 427 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 GTF2A2P52657 109 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 MCTP2Q6DN12 878 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 CUL5Q93034 780 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 OPTNQ96CV9 577 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 OTUD5Q96G74 571 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 CLMNQ96JQ2 1002 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 RPAP3Q9H6T3 665 aaPredicted RBP16.79■□□□□ 0.28
CAPN12-202ENST00000593700 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
CAPN12-202ENST00000593700 ELP1O95163 1332 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 CCDC194A0A1B0GVG4 234 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 BTBD18B2RXH4 712 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 KIF28PB7ZC32 967 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 CXCL11O14625 94 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 ALDH1A1P00352 501 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 KIAA1755Q5JYT7 1200 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
CAPN12-202ENST00000593700 TMEM87AQ8NBN3 555 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
CAPN12-202ENST00000593700 MS4A4AQ96JQ5 239 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 SPATA32Q96LK8 384 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 RANBP17Q9H2T7 1088 aaKnown RBP16.78■□□□□ 0.28
CAPN12-202ENST00000593700 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L15C9J2P7 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L13C9JLJ4 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L11C9JVI0 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L18D6R9N7 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L22D6RA61 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L17D6RBQ6 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L19D6RCP7 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L20D6RJB6 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 CETPP11597 493 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 TM4SF4P48230 202 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
CAPN12-202ENST00000593700 USP17L24Q0WX57 530 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 PABPC4Q13310 644 aaKnown RBP eCLIP16.77■□□□□ 0.28
CAPN12-202ENST00000593700 SKOR2Q2VWA4 1001 aaPredicted RBP16.77■□□□□ 0.28
CAPN12-202ENST00000593700 KRT25Q7Z3Z0 450 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.28
CAPN12-202ENST00000593700 POLR3EQ9NVU0 708 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 SAGE1Q9NXZ1 904 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 PPP1R9AQ9ULJ8 1098 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.28
CAPN12-202ENST00000593700 CEP350Q5VT06 3117 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 ABCB11O95342 1321 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 ZBED4O75132 1171 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 YEATS4O95619 227 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 BMP15O95972 392 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 NR5A1Q13285 461 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 STK38Q15208 465 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 COA7Q96BR5 231 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 RIC8AQ9NPQ8 531 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 KCNH4Q9UQ05 1017 aa16.76■□□□□ 0.27
CAPN12-202ENST00000593700 SMCHD1A6NHR9 2005 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 A0A0G2JLL6 359 aaPredicted RBP16.75■□□□□ 0.27
CAPN12-202ENST00000593700 TESPA1A2RU30 521 aaPredicted RBP16.75■□□□□ 0.27
CAPN12-202ENST00000593700 GOLGA6L4A6NEF3 574 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 AOC2O75106 756 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 MBD3O95983 291 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 SF3A1Q15459 793 aaKnown RBP16.75■□□□□ 0.27
CAPN12-202ENST00000593700 USH1GQ495M9 461 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms