RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 TTC9BQ8N6N2 239 aa8.07□□□□□ -1.12
SOX2-OT-219ENST00000593330 SPATA25Q9BR10 227 aa8.07□□□□□ -1.12
SOX2-OT-219ENST00000593330 SRRTQ9BXP5 876 aaKnown RBP8.07□□□□□ -1.12
SOX2-OT-219ENST00000593330 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
SOX2-OT-219ENST00000593330 KBTBD4Q9NVX7 518 aa8.07□□□□□ -1.12
SOX2-OT-219ENST00000593330 MEIS3P2A8K0S8 358 aa8.06□□□□□ -1.12
SOX2-OT-219ENST00000593330 GREM1O60565 184 aa8.06□□□□□ -1.12
SOX2-OT-219ENST00000593330 FBLN1P23142 703 aa8.06□□□□□ -1.12
SOX2-OT-219ENST00000593330 ERMP1Q7Z2K6 904 aa8.06□□□□□ -1.12
SOX2-OT-219ENST00000593330 C7orf61Q8IZ16 206 aa8.06□□□□□ -1.12
SOX2-OT-219ENST00000593330 NLGN2Q8NFZ4 835 aa8.06□□□□□ -1.12
SOX2-OT-219ENST00000593330 MINPP1Q9UNW1 487 aa8.06□□□□□ -1.12
SOX2-OT-219ENST00000593330 F8W031 263 aaPredicted RBP8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 ITGB3P05106 788 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 ZXDAP98168 799 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 RTP2Q5QGT7 225 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 SND1Q7KZF4 910 aaKnown RBP eCLIP8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 B3GNT8Q7Z7M8 397 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 USP48Q86UV5 1035 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 FERMT3Q86UX7 667 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 CARFQ8N187 725 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 TMEM52Q8NDY8 209 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 NTMQ9P121 344 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 NUDT5Q9UKK9 219 aa8.05□□□□□ -1.12
SOX2-OT-219ENST00000593330 ADAM17P78536 824 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 PRR5P85299 388 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 NOL9Q5SY16 702 aaKnown RBP8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 CPZQ66K79 652 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 INTS3Q68E01 1043 aaKnown RBP8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 TTLL7Q6ZT98 887 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 TMEM192Q8IY95 271 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 SLC12A9Q9BXP2 914 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 LNPKQ9C0E8 428 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 PCDH18Q9HCL0 1135 aa8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 SUCOQ9UBS9 1254 aaKnown RBP8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 SF3B6Q9Y3B4 125 aaKnown RBP8.04□□□□□ -1.12
SOX2-OT-219ENST00000593330 C1QTNF3-AMACRE9PGA6 284 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 NOBOXO60393 691 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 MCM4P33991 863 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 CNR2P34972 360 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 CEBPAP49715 358 aaPredicted RBP8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 SLC9A5Q14940 896 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 GK5Q6ZS86 529 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 ALG3Q92685 438 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 SAMD11Q96NU1 681 aa8.03□□□□□ -1.12
SOX2-OT-219ENST00000593330 FGF10O15520 208 aaPredicted RBP8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 SUV39H1O43463 412 aa8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 ATF2P15336 505 aa8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 TNFRSF1AP19438 455 aa8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 L1CAMP32004 1257 aa8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 SEZ6Q53EL9 994 aa8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 ZNF296Q8WUU4 475 aaPredicted RBP8.02□□□□□ -1.13
SOX2-OT-219ENST00000593330 AKAP8O43823 692 aaKnown RBP8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 IMPDH2P12268 514 aa8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 SARSP49591 514 aaKnown RBP8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 ZNF526Q8TF50 670 aaPredicted RBP8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 CPA5Q8WXQ8 436 aa8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 TSPAN17Q96FV3 270 aa8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 PEX11GQ96HA9 241 aa8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 TRAIPQ9BWF2 469 aa8.01□□□□□ -1.13
SOX2-OT-219ENST00000593330 ASGR2P07307 311 aa8□□□□□ -1.13
SOX2-OT-219ENST00000593330 ERCC3P19447 782 aa8□□□□□ -1.13
SOX2-OT-219ENST00000593330 POU4F1Q01851 419 aa8□□□□□ -1.13
SOX2-OT-219ENST00000593330 KIAA2012Q0VF49 1180 aa8□□□□□ -1.13
SOX2-OT-219ENST00000593330 FAM124AQ86V42 546 aa8□□□□□ -1.13
SOX2-OT-219ENST00000593330 DDX1Q92499 740 aaKnown RBP8□□□□□ -1.13
SOX2-OT-219ENST00000593330 C1QTNF3Q9BXJ4 246 aa8□□□□□ -1.13
SOX2-OT-219ENST00000593330 FHOD1Q9Y613 1164 aa8□□□□□ -1.13
SOX2-OT-219ENST00000593330 A0A1B0GTL3 188 aa7.99□□□□□ -1.13
SOX2-OT-219ENST00000593330 ZBTB7AO95365 584 aa7.99□□□□□ -1.13
SOX2-OT-219ENST00000593330 PMS1P54277 932 aaKnown RBP7.99□□□□□ -1.13
SOX2-OT-219ENST00000593330 CLCQ05315 142 aa7.99□□□□□ -1.13
SOX2-OT-219ENST00000593330 HS2ST1Q7LGA3 356 aa7.99□□□□□ -1.13
SOX2-OT-219ENST00000593330 ADGRG2Q8IZP9 1017 aa7.99□□□□□ -1.13
SOX2-OT-219ENST00000593330 PTCHD1Q96NR3 888 aa7.99□□□□□ -1.13
SOX2-OT-219ENST00000593330 SMARCA5O60264 1052 aaPredicted RBP7.98□□□□□ -1.13
SOX2-OT-219ENST00000593330 FBXO33Q7Z6M2 555 aa7.98□□□□□ -1.13
SOX2-OT-219ENST00000593330 NETO2Q8NC67 525 aa7.98□□□□□ -1.13
SOX2-OT-219ENST00000593330 RNF34Q969K3 372 aa7.98□□□□□ -1.13
SOX2-OT-219ENST00000593330 SLC9A7Q96T83 725 aa7.98□□□□□ -1.13
SOX2-OT-219ENST00000593330 CRKP46108 304 aa7.97□□□□□ -1.13
SOX2-OT-219ENST00000593330 BORAQ6PGQ7 559 aa7.97□□□□□ -1.13
SOX2-OT-219ENST00000593330 TAB3Q8N5C8 712 aaPredicted RBP7.97□□□□□ -1.13
SOX2-OT-219ENST00000593330 CHST13Q8NET6 341 aa7.97□□□□□ -1.13
SOX2-OT-219ENST00000593330 NKD1Q969G9 470 aa7.97□□□□□ -1.13
SOX2-OT-219ENST00000593330 LOXL4Q96JB6 756 aa7.97□□□□□ -1.13
SOX2-OT-219ENST00000593330 A0A087WZG4 1122 aa7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 H0Y8X5 98 aa7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 MATN3O15232 486 aa7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 PLATP00750 562 aa7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 GLI4P10075 376 aa7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 ITGA4P13612 1032 aa7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 DLX2Q07687 328 aaPredicted RBP7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 EEF1DP3Q658K8 133 aa7.96□□□□□ -1.14
SOX2-OT-219ENST00000593330 SLITRK4Q8IW52 837 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms