RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 E2F4Q16254 413 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 UBE2SQ16763 222 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 BTNL9Q6UXG8 535 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 MIGA2Q7L4E1 593 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 SH3RF1Q7Z6J0 888 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 DPF2Q92785 391 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 DACH1Q9UI36 760 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 MYH7BA7E2Y1 1941 aa13.52□□□□□ -0.24
NPC1-214ENST00000593280 IKBKBO14920 756 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 CAP2P40123 477 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 AFMP43652 599 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 PRELPP51888 382 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 RASA3Q14644 834 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 PDXDC2PQ6P474 469 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 ACER1Q8TDN7 264 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 AK8Q96MA6 479 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 AMNQ9BXJ7 453 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
NPC1-214ENST00000593280 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.25
NPC1-214ENST00000593280 EGFRP00533 1210 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 TPM3P06753 285 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 CDC25BP30305 580 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 UBA7P41226 1012 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 STAT6P42226 847 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 STAT2P52630 851 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 MAP3K10Q02779 954 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 MORC3Q14149 939 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 FBXO11Q86XK2 927 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 DRC7Q8IY82 874 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 SPC24Q8NBT2 197 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 RASSF8Q8NHQ8 419 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 SPATA20Q8TB22 786 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 DISC1Q9NRI5 854 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
NPC1-214ENST00000593280 ZNF541Q9H0D2 1346 aa13.51□□□□□ -0.25
NPC1-214ENST00000593280 ASNSP08243 561 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 BMP6P22004 513 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 MYL5Q02045 173 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 DPYDQ12882 1025 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 NCAPHQ15003 741 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 KARSQ15046 597 aaKnown RBP13.5□□□□□ -0.25
NPC1-214ENST00000593280 CALCRLQ16602 461 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 KIF4BQ2VIQ3 1234 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 TBC1D10BQ4KMP7 808 aaPredicted RBP13.5□□□□□ -0.25
NPC1-214ENST00000593280 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 MLKLQ8NB16 471 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 MRFAP1L1Q96HT8 127 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 NAP1L4Q99733 375 aaKnown RBP13.5□□□□□ -0.25
NPC1-214ENST00000593280 CCSER1Q9C0I3 900 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
NPC1-214ENST00000593280 PP2D1A8MPX8 630 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 CDC25AP30304 524 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 SNAP25P60880 206 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 FAM83BQ5T0W9 1011 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 RRAGBQ5VZM2 374 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 MCTP2Q6DN12 878 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 TEPSINQ96N21 525 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 GSDMAQ96QA5 445 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 VCPKMTQ9H867 229 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
NPC1-214ENST00000593280 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
NPC1-214ENST00000593280 PRR12Q9ULL5 1215 aa13.5□□□□□ -0.25
NPC1-214ENST00000593280 SCAF8Q9UPN6 1271 aaKnown RBP13.5□□□□□ -0.25
NPC1-214ENST00000593280 DOCK1Q14185 1865 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 GTPBP6O43824 516 aaPredicted RBP13.49□□□□□ -0.25
NPC1-214ENST00000593280 SLC37A4O43826 429 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 TDP2O95551 362 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 GCFC2P16383 781 aaKnown RBP13.49□□□□□ -0.25
NPC1-214ENST00000593280 CLCN1P35523 988 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 TRAF1Q13077 416 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 AP3B2Q13367 1082 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 TMEM266Q2M3C6 531 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 USH1GQ495M9 461 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 PPP4R3AQ6IN85 833 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 CABP7Q86V35 215 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 MTMR9Q96QG7 549 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 HACL1Q9UJ83 578 aa13.49□□□□□ -0.25
NPC1-214ENST00000593280 PHF20L1A8MW92 1017 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 CASP1P29466 404 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 TECP42680 631 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 ZYXQ15942 572 aaKnown RBP13.48□□□□□ -0.25
NPC1-214ENST00000593280 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 CHURC1Q8WUH1 139 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 STAMQ92783 540 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 FEZ1Q99689 392 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms