RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.64■□□□□ 0.41
ERCC1-217ENST00000592905 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
ERCC1-217ENST00000592905 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.41
ERCC1-217ENST00000592905 TINF2Q9BSI4 451 aa17.64■□□□□ 0.41
ERCC1-217ENST00000592905 MTA3Q9BTC8 594 aa17.64■□□□□ 0.41
ERCC1-217ENST00000592905 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
ERCC1-217ENST00000592905 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 ANO1Q5XXA6 986 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 HOMER1Q86YM7 354 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 TMTC2Q8N394 836 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 CLEC4DQ8WXI8 215 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 FGD4Q96M96 766 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 CYP39A1Q9NYL5 469 aa17.63■□□□□ 0.41
ERCC1-217ENST00000592905 DDX49Q9Y6V7 483 aaKnown RBP17.63■□□□□ 0.41
ERCC1-217ENST00000592905 SOWAHBA6NEL2 793 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 CYTH3O43739 400 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 CYBAP13498 195 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 BAATQ14032 418 aaPredicted RBP17.62■□□□□ 0.41
ERCC1-217ENST00000592905 LHX8Q68G74 356 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
ERCC1-217ENST00000592905 FAM133AQ8N9E0 248 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
ERCC1-217ENST00000592905 PIGSQ96S52 555 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 SLC12A7Q9Y666 1083 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 WDR19Q8NEZ3 1342 aa17.62■□□□□ 0.41
ERCC1-217ENST00000592905 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 PPP1R11O60927 126 aaPredicted RBP17.61■□□□□ 0.41
ERCC1-217ENST00000592905 DDAH1O94760 285 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 FBXO11Q86XK2 927 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 TBC1D5Q92609 795 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 CRISPLD2Q9H0B8 497 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 RIOX1Q9H6W3 641 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 BRPF3Q9ULD4 1205 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 PFASO15067 1338 aa17.61■□□□□ 0.41
ERCC1-217ENST00000592905 PLEKHA8P1O95397 391 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 SNAI1O95863 264 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-217ENST00000592905 HMGB1P09429 215 aaKnown RBP17.6■□□□□ 0.41
ERCC1-217ENST00000592905 CASTP20810 708 aaKnown RBP17.6■□□□□ 0.41
ERCC1-217ENST00000592905 CALML3P27482 149 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 FGD1P98174 961 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 BLOC1S2Q6QNY1 142 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 SLC30A10Q6XR72 485 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 Q6ZUG5 572 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 MICU3Q86XE3 530 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 MTMR8Q96EF0 704 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 DDX20Q9UHI6 824 aaKnown RBP17.6■□□□□ 0.41
ERCC1-217ENST00000592905 ASTN1O14525 1302 aa17.6■□□□□ 0.41
ERCC1-217ENST00000592905 ABCB11O95342 1321 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 ZBTB5O15062 677 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 FARP2O94887 1054 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-217ENST00000592905 SEC24BO95487 1268 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 KIF5BP33176 963 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 MAMDC4Q6UXC1 1216 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 RNF207Q6ZRF8 634 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 ZNF467Q7Z7K2 595 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-217ENST00000592905 SGMS1Q86VZ5 419 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 CCDC82Q8N4S0 544 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 SRBD1Q8N5C6 995 aaKnown RBP17.59■□□□□ 0.41
ERCC1-217ENST00000592905 DIS3LQ8TF46 1054 aaKnown RBP17.59■□□□□ 0.41
ERCC1-217ENST00000592905 MAP3K14Q99558 947 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 OGDHLQ9ULD0 1010 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-217ENST00000592905 DNAH12Q6ZR08 3092 aa17.59■□□□□ 0.41
ERCC1-217ENST00000592905 KLF18A0A0U1RQI7 1052 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 EPB41L2O43491 1005 aaKnown RBP17.58■□□□□ 0.4
ERCC1-217ENST00000592905 ZNF865P0CJ78 1059 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-217ENST00000592905 CALM1P0DP23 149 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 CALM2P0DP24 149 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 CALM3P0DP25 149 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 RPS6P62753 249 aaKnown RBP17.58■□□□□ 0.4
ERCC1-217ENST00000592905 APOBRQ0VD83 1088 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 APOA5Q6Q788 366 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 ARMCX2Q7L311 632 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 FANCBQ8NB91 859 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 PAWRQ96IZ0 340 aaKnown RBP17.58■□□□□ 0.4
ERCC1-217ENST00000592905 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-217ENST00000592905 ZHX1Q9UKY1 873 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-217ENST00000592905 CNPY2Q9Y2B0 182 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 PCDHA1Q9Y5I3 950 aa17.58■□□□□ 0.4
ERCC1-217ENST00000592905 SYNGAP1Q96PV0 1343 aa17.57■□□□□ 0.4
ERCC1-217ENST00000592905 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
ERCC1-217ENST00000592905 SEPT4O43236 478 aa17.57■□□□□ 0.4
ERCC1-217ENST00000592905 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-217ENST00000592905 PSMA5P28066 241 aa17.57■□□□□ 0.4
ERCC1-217ENST00000592905 MNX1P50219 401 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-217ENST00000592905 MSL3Q8N5Y2 521 aaKnown RBP17.57■□□□□ 0.4
ERCC1-217ENST00000592905 BRF1Q92994 677 aa17.57■□□□□ 0.4
ERCC1-217ENST00000592905 LENG1Q96BZ8 264 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-217ENST00000592905 MRPL11Q9Y3B7 192 aaKnown RBP17.57■□□□□ 0.4
ERCC1-217ENST00000592905 PNMA6FA0A0J9YX94 578 aa17.56■□□□□ 0.4
ERCC1-217ENST00000592905 ZBTB43O43298 467 aa17.56■□□□□ 0.4
ERCC1-217ENST00000592905 ACVR2BQ13705 512 aa17.56■□□□□ 0.4
ERCC1-217ENST00000592905 EEPD1Q7L9B9 569 aa17.56■□□□□ 0.4
ERCC1-217ENST00000592905 UBE2Q1Q7Z7E8 422 aa17.56■□□□□ 0.4
ERCC1-217ENST00000592905 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms