RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	DHX32	Q7L7V1	743 aa	Known RBP	19.01	■□□□□ 0.63
TMC6-223	ENST00000592594	SGMS1	Q86VZ5	419 aa		19.01	■□□□□ 0.63
TMC6-223	ENST00000592594	HMX1	Q9NP08	348 aa	Predicted RBP	19.01	■□□□□ 0.63
TMC6-223	ENST00000592594	FBXO40	Q9UH90	709 aa		19.01	■□□□□ 0.63
TMC6-223	ENST00000592594	BRPF3	Q9ULD4	1205 aa		19.01	■□□□□ 0.63
TMC6-223	ENST00000592594	DDX49	Q9Y6V7	483 aa	Known RBP	19.01	■□□□□ 0.63
TMC6-223	ENST00000592594	SOWAHB	A6NEL2	793 aa		19	■□□□□ 0.63
TMC6-223	ENST00000592594	EPB41L2	O43491	1005 aa	Known RBP	19	■□□□□ 0.63
TMC6-223	ENST00000592594	SGPL1	O95470	568 aa		19	■□□□□ 0.63
TMC6-223	ENST00000592594	PRAMEF19	Q5SWL8	479 aa		19	■□□□□ 0.63
TMC6-223	ENST00000592594	SLC30A10	Q6XR72	485 aa		19	■□□□□ 0.63
TMC6-223	ENST00000592594	JAKMIP1	Q96N16	626 aa	Known RBP	19	■□□□□ 0.63
TMC6-223	ENST00000592594	RIOX1	Q9H6W3	641 aa		19	■□□□□ 0.63
TMC6-223	ENST00000592594	CYP39A1	Q9NYL5	469 aa		19	■□□□□ 0.63
TMC6-223	ENST00000592594	DNAH12	Q6ZR08	3092 aa		19	■□□□□ 0.63
TMC6-223	ENST00000592594	OPLAH	O14841	1288 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	PLEKHA8P1	O95397	391 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	SEC24B	O95487	1268 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	KRT32	Q14532	448 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	USH1G	Q495M9	461 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	MFSD14C	Q5VZR4	134 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	LHX8	Q68G74	356 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	CATIP	Q7Z7H3	387 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	ANKRD35	Q8N283	1001 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	NUP133	Q8WUM0	1156 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	TINF2	Q9BSI4	451 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	VAT1L	Q9HCJ6	419 aa		18.99	■□□□□ 0.63
TMC6-223	ENST00000592594	SNAI1	O95863	264 aa	Predicted RBP	18.98	■□□□□ 0.63
TMC6-223	ENST00000592594	APOA5	Q6Q788	366 aa		18.98	■□□□□ 0.63
TMC6-223	ENST00000592594	MAMDC4	Q6UXC1	1216 aa		18.98	■□□□□ 0.63
TMC6-223	ENST00000592594	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.98	■□□□□ 0.63
TMC6-223	ENST00000592594	DDX11	Q96FC9	970 aa		18.98	■□□□□ 0.63
TMC6-223	ENST00000592594	MAP3K14	Q99558	947 aa		18.98	■□□□□ 0.63
TMC6-223	ENST00000592594	KATNBL1	Q9H079	304 aa		18.98	■□□□□ 0.63
TMC6-223	ENST00000592594	CCDC144CP	Q8IYA2	1237 aa		18.97	■□□□□ 0.63
TMC6-223	ENST00000592594	TBC1D5	Q92609	795 aa		18.97	■□□□□ 0.63
TMC6-223	ENST00000592594	PIGS	Q96S52	555 aa		18.97	■□□□□ 0.63
TMC6-223	ENST00000592594	PFAS	O15067	1338 aa		18.97	■□□□□ 0.63
TMC6-223	ENST00000592594	CCDC69	A6NI79	296 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	ADCY6	O43306	1168 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	RPS6KB1	P23443	525 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	BAAT	Q14032	418 aa	Predicted RBP	18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	C8orf34	Q49A92	452 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	NSMF	Q6X4W1	530 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	MICU3	Q86XE3	530 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	CMTR1	Q8N1G2	835 aa	Known RBP	18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	SRBD1	Q8N5C6	995 aa	Known RBP	18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	DIS3L	Q8TF46	1054 aa	Known RBP	18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	AGXT2	Q9BYV1	514 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	SLC5A4	Q9NY91	659 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	COL20A1	Q9P218	1284 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	OGDHL	Q9ULD0	1010 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	SYNGAP1	Q96PV0	1343 aa		18.96	■□□□□ 0.63
TMC6-223	ENST00000592594	POTEB2	H3BUK9	544 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	ZBTB5	O15062	677 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	DHX16	O60231	1041 aa	Known RBP	18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	NFXL1	Q6ZNB6	911 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	FBXO11	Q86XK2	927 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	TMTC2	Q8N394	836 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	LENG1	Q96BZ8	264 aa	Predicted RBP	18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	SPZ1	Q9BXG8	430 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	DDX20	Q9UHI6	824 aa	Known RBP	18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	SLC12A7	Q9Y666	1083 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	ABCB11	O95342	1321 aa		18.95	■□□□□ 0.62
TMC6-223	ENST00000592594	NID2	Q14112	1375 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	HMGB1	P09429	215 aa	Known RBP	18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	CAST	P20810	708 aa	Known RBP	18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	RPS6	P62753	249 aa	Known RBP	18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	FUT2	Q10981	343 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	ANO1	Q5XXA6	986 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	BLOC1S2	Q6QNY1	142 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594		Q6ZUG5	572 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	TMTC3	Q6ZXV5	915 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	ARMCX2	Q7L311	632 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	HOMER1	Q86YM7	354 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	FBXL16	Q8N461	479 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	MSL3	Q8N5Y2	521 aa	Known RBP	18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	ZSWIM6	Q9HCJ5	1215 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	CNTNAP5	Q8WYK1	1306 aa		18.94	■□□□□ 0.62
TMC6-223	ENST00000592594	SEPT4	O43236	478 aa		18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	GHRHR	Q02643	423 aa		18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	APOBR	Q0VD83	1088 aa		18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	RNF207	Q6ZRF8	634 aa		18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	CTCFL	Q8NI51	663 aa	Predicted RBP	18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	MORC4	Q8TE76	937 aa		18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	IL17RA	Q96F46	866 aa		18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	PNMA2	Q9UL42	364 aa		18.93	■□□□□ 0.62
TMC6-223	ENST00000592594	DOCK5	Q9H7D0	1870 aa		18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	KLF18	A0A0U1RQI7	1052 aa		18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	PTPDC1	A2A3K4	754 aa		18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	FARP2	O94887	1054 aa	Predicted RBP	18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	CNGA1	P29973	690 aa		18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	CDC27	P30260	824 aa		18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	TOB2	Q14106	344 aa	Predicted RBP	18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	FANCB	Q8NB91	859 aa		18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	PIBF1	Q8WXW3	757 aa		18.92	■□□□□ 0.62
TMC6-223	ENST00000592594	BRF1	Q92994	677 aa		18.92	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms