RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 SRA1Q9HD15 236 aaKnown RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 HMG20BQ9P0W2 317 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 STOML1Q9UBI4 398 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 MRFAP1Q9Y605 127 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 GOLGA6L7A0A1B0GV03 622 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 ZBTB7CA1YPR0 619 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 STX10O60499 249 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 URI1O94763 535 aaPredicted RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 GNAI2P04899 355 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 GCFC2P16383 781 aaKnown RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 TARSP26639 723 aaKnown RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 SLC8A1P32418 973 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 MRPL12P52815 198 aaKnown RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 SLC8A3P57103 927 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 FAM160A1Q05DH4 1040 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 WHAMMP3Q1A5X7 153 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 E4F1Q66K89 784 aaPredicted RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 IQCEQ6IPM2 695 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 CCDC70Q6NSX1 233 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 INTS5Q6P9B9 1019 aaKnown RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 KRT25Q7Z3Z0 450 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 CERS3Q8IU89 383 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 CCDC83Q8IWF9 413 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 OGFOD1Q8N543 542 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 C3orf20Q8ND61 904 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 AFAP1L1Q8TED9 768 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 PLCD4Q9BRC7 762 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 LLPHQ9BRT6 129 aaKnown RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 VPS18Q9P253 973 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 NRKQ7Z2Y5 1582 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 ITSN1Q15811 1721 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 FMN2Q9NZ56 1722 aa6.72□□□□□ -1.33
NPC1-213ENST00000591955 RGPD8O14715 1765 aaPredicted RBP6.72□□□□□ -1.33
NPC1-213ENST00000591955 A0A1W2PQ27 194 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 A0A1W2PQ64 194 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 A0A1W2PQD8 194 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 VPS37CA5D8V6 355 aaPredicted RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 USP17L3A6NCW0 530 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 USP17L4A6NCW7 530 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 SHOX2O60902 331 aaPredicted RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 RARAP10276 462 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 EZRP15311 586 aaKnown RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 ELF1P32519 619 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 AMPHP49418 695 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 CDR1P51861 262 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 AK2P54819 239 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 NRLP54845 237 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 ST5P78524 1137 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 GNL2Q13823 731 aaKnown RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 SETDB1Q15047 1291 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 PDCD2Q16342 344 aaPredicted RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 CCDC144BQ3MJ40 725 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 CCDC38Q502W7 563 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 RCSD1Q6JBY9 416 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 WDR93Q6P2C0 686 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 USP17L2Q6R6M4 530 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 USP17L1Q7RTZ2 530 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 KRT27Q7Z3Y8 459 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 SRGAP1Q7Z6B7 1085 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 TTC6Q86TZ1 520 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 DTX1Q86Y01 620 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 UNC5CLQ8IV45 518 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 MAP4K3Q8IVH8 894 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 CCDC144CPQ8IYA2 1237 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 AGGF1Q8N302 714 aaeCLIP6.71□□□□□ -1.34
NPC1-213ENST00000591955 PRPF38AQ8NAV1 312 aaKnown RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 LEO1Q8WVC0 666 aaPredicted RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 SCG3Q8WXD2 468 aaKnown RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 UBL7Q96S82 380 aaPredicted RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 SH3GL3Q99963 347 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 PAGR1Q9BTK6 254 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 DNAJC25Q9H1X3 360 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 HOMER3Q9NSC5 361 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 PDRG1Q9NUG6 133 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 MYO6Q9UM54 1294 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 USP42Q9H9J4 1324 aaKnown RBP6.71□□□□□ -1.34
NPC1-213ENST00000591955 TUBGCP6Q96RT7 1819 aa6.71□□□□□ -1.34
NPC1-213ENST00000591955 FSBPO95073 299 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 GLB1P16278 677 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 IDH3AP50213 366 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 CHMP4BP1P59074 171 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 APBA1Q02410 837 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 EZH2Q15910 746 aaKnown RBP6.7□□□□□ -1.34
NPC1-213ENST00000591955 NAA16Q6N069 864 aaPredicted RBP6.7□□□□□ -1.34
NPC1-213ENST00000591955 HFE2Q6ZVN8 426 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.7□□□□□ -1.34
NPC1-213ENST00000591955 ARMC9Q7Z3E5 817 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 HDGFL2Q7Z4V5 671 aaPredicted RBP6.7□□□□□ -1.34
NPC1-213ENST00000591955 SMARCC1Q92922 1105 aaPredicted RBP6.7□□□□□ -1.34
NPC1-213ENST00000591955 ANKRD27Q96NW4 1050 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 CARD6Q9BX69 1037 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 MOV10L1Q9BXT6 1211 aaKnown RBP6.7□□□□□ -1.34
NPC1-213ENST00000591955 PARD6BQ9BYG5 372 aa6.7□□□□□ -1.34
NPC1-213ENST00000591955 TRIM6Q9C030 488 aaPredicted RBP6.7□□□□□ -1.34
NPC1-213ENST00000591955 C14orf93Q9H972 538 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms