RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 COA7Q96BR5 231 aa19.98■□□□□ 0.79
AP3D1-211ENST00000591650 LLPHQ9BRT6 129 aaKnown RBP19.98■□□□□ 0.79
AP3D1-211ENST00000591650 RNF146Q9NTX7 359 aa19.98■□□□□ 0.79
AP3D1-211ENST00000591650 RBM27Q9P2N5 1060 aaKnown RBP19.98■□□□□ 0.79
AP3D1-211ENST00000591650 ORC3Q9UBD5 711 aaPredicted RBP19.98■□□□□ 0.79
AP3D1-211ENST00000591650 PLXNA1Q9UIW2 1896 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 ERCC3P19447 782 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 CCNA1P78396 465 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 AKAP17AQ02040 695 aaKnown RBP19.97■□□□□ 0.79
AP3D1-211ENST00000591650 MUM1L1Q5H9M0 696 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 NCAPG2Q86XI2 1143 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 SHISA4Q96DD7 197 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 ARHGAP39Q9C0H5 1083 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 PCDHA1Q9Y5I3 950 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 ABCB11O95342 1321 aa19.97■□□□□ 0.79
AP3D1-211ENST00000591650 CASP8AP2Q9UKL3 1982 aa19.96■□□□□ 0.79
AP3D1-211ENST00000591650 STXBP3O00186 592 aa19.96■□□□□ 0.79
AP3D1-211ENST00000591650 DEXIO95424 95 aa19.96■□□□□ 0.79
AP3D1-211ENST00000591650 CTGFP29279 349 aa19.96■□□□□ 0.79
AP3D1-211ENST00000591650 SP3Q02447 781 aa19.96■□□□□ 0.79
AP3D1-211ENST00000591650 SHCBP1Q8NEM2 672 aa19.96■□□□□ 0.79
AP3D1-211ENST00000591650 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
AP3D1-211ENST00000591650 NFIBO00712 420 aa19.95■□□□□ 0.78
AP3D1-211ENST00000591650 OPLAHO14841 1288 aa19.95■□□□□ 0.78
AP3D1-211ENST00000591650 FKTNO75072 461 aa19.95■□□□□ 0.78
AP3D1-211ENST00000591650 SLC25A27O95847 323 aa19.95■□□□□ 0.78
AP3D1-211ENST00000591650 LACTBP83111 547 aaPredicted RBP19.95■□□□□ 0.78
AP3D1-211ENST00000591650 WDR78Q5VTH9 848 aa19.95■□□□□ 0.78
AP3D1-211ENST00000591650 CLEC4DQ8WXI8 215 aa19.95■□□□□ 0.78
AP3D1-211ENST00000591650 COPB2P35606 906 aa19.94■□□□□ 0.78
AP3D1-211ENST00000591650 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
AP3D1-211ENST00000591650 ACAD9Q9H845 621 aa19.94■□□□□ 0.78
AP3D1-211ENST00000591650 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
AP3D1-211ENST00000591650 BARHL2Q9NY43 387 aa19.94■□□□□ 0.78
AP3D1-211ENST00000591650 VPS54Q9P1Q0 977 aa19.94■□□□□ 0.78
AP3D1-211ENST00000591650 PNMA2Q9UL42 364 aa19.94■□□□□ 0.78
AP3D1-211ENST00000591650 hCG_1984214I3L0E3 225 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 MAPK4P31152 587 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 FOSBP53539 338 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 NAPAP54920 295 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 HMGN5P82970 282 aaKnown RBP19.93■□□□□ 0.78
AP3D1-211ENST00000591650 GPR142Q7Z601 462 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 ZNF713Q8N859 430 aaPredicted RBP19.93■□□□□ 0.78
AP3D1-211ENST00000591650 CHST13Q8NET6 341 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 CD99L2Q8TCZ2 262 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 MROH8Q9H579 483 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 LRRC37A2A6NM11 1700 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 GJB2P29033 226 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 PPP1R18Q6NYC8 613 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 TRIM47Q96LD4 638 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 ALG1Q9BT22 464 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 GJB4Q9NTQ9 266 aa19.93■□□□□ 0.78
AP3D1-211ENST00000591650 MRPL11Q9Y3B7 192 aaKnown RBP19.93■□□□□ 0.78
AP3D1-211ENST00000591650 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.93■□□□□ 0.78
AP3D1-211ENST00000591650 SLC30A10Q6XR72 485 aa19.92■□□□□ 0.78
AP3D1-211ENST00000591650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.92■□□□□ 0.78
AP3D1-211ENST00000591650 CCAR1Q8IX12 1150 aaKnown RBP19.92■□□□□ 0.78
AP3D1-211ENST00000591650 A1CFQ9NQ94 594 aaKnown RBP19.92■□□□□ 0.78
AP3D1-211ENST00000591650 FBXO40Q9UH90 709 aa19.92■□□□□ 0.78
AP3D1-211ENST00000591650 SMC3Q9UQE7 1217 aa19.92■□□□□ 0.78
AP3D1-211ENST00000591650 RBM19Q9Y4C8 960 aaKnown RBP19.92■□□□□ 0.78
AP3D1-211ENST00000591650 TNPO2O14787 897 aaKnown RBP19.91■□□□□ 0.78
AP3D1-211ENST00000591650 ANP32AP39687 249 aaKnown RBP19.91■□□□□ 0.78
AP3D1-211ENST00000591650 PSMC4P43686 418 aa19.91■□□□□ 0.78
AP3D1-211ENST00000591650 FCGRTP55899 365 aa19.91■□□□□ 0.78
AP3D1-211ENST00000591650 TRAF1Q13077 416 aa19.91■□□□□ 0.78
AP3D1-211ENST00000591650 BECN1Q14457 450 aa19.91■□□□□ 0.78
AP3D1-211ENST00000591650 NSMFQ6X4W1 530 aa19.91■□□□□ 0.78
AP3D1-211ENST00000591650 PLEKHH3Q7Z736 793 aa19.91■□□□□ 0.78
AP3D1-211ENST00000591650 TBC1D5Q92609 795 aa19.91■□□□□ 0.78
AP3D1-211ENST00000591650 INTS4Q96HW7 963 aaKnown RBP19.91■□□□□ 0.78
AP3D1-211ENST00000591650 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
AP3D1-211ENST00000591650 ADAMTS3O15072 1205 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 GRB14Q14449 540 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 SPRYD3Q8NCJ5 442 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 WASF1Q92558 559 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 ERO1AQ96HE7 468 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 MMP19Q99542 508 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 IVNS1ABPQ9Y6Y0 642 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 MCM3APO60318 1980 aa19.9■□□□□ 0.78
AP3D1-211ENST00000591650 KIF22Q14807 665 aa19.89■□□□□ 0.77
AP3D1-211ENST00000591650 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
AP3D1-211ENST00000591650 CCDC148Q8NFR7 591 aa19.89■□□□□ 0.77
AP3D1-211ENST00000591650 PRDM10Q9NQV6 1147 aa19.89■□□□□ 0.77
AP3D1-211ENST00000591650 SH3GLB2Q9NR46 395 aa19.89■□□□□ 0.77
AP3D1-211ENST00000591650 CYP39A1Q9NYL5 469 aa19.89■□□□□ 0.77
AP3D1-211ENST00000591650 KCNJ14Q9UNX9 436 aa19.89■□□□□ 0.77
AP3D1-211ENST00000591650 ESYT2A0FGR8 921 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 CFBP00751 764 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 PGK2P07205 417 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 FCER1AP12319 257 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 PTPREP23469 700 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 ADORA2AP29274 412 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 HOXA13P31271 388 aaPredicted RBP19.88■□□□□ 0.77
AP3D1-211ENST00000591650 ADCY7P51828 1080 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 GHRHRQ02643 423 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 BAATQ14032 418 aaPredicted RBP19.88■□□□□ 0.77
AP3D1-211ENST00000591650 NPY5RQ15761 445 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 UBE2SQ16763 222 aa19.88■□□□□ 0.77
AP3D1-211ENST00000591650 MORN1Q5T089 497 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms