RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PTPREP23469 700 aa19.24■□□□□ 0.67
GCDH-213ENST00000590627 CCND3P30281 292 aaPredicted RBP19.24■□□□□ 0.67
GCDH-213ENST00000590627 ADD1P35611 737 aaKnown RBP19.24■□□□□ 0.67
GCDH-213ENST00000590627 SLC1A4P43007 532 aa19.24■□□□□ 0.67
GCDH-213ENST00000590627 TMTC3Q6ZXV5 915 aa19.24■□□□□ 0.67
GCDH-213ENST00000590627 CCDC144CPQ8IYA2 1237 aa19.24■□□□□ 0.67
GCDH-213ENST00000590627 IPO9Q96P70 1041 aaKnown RBP19.24■□□□□ 0.67
GCDH-213ENST00000590627 RPAP3Q9H6T3 665 aaPredicted RBP19.24■□□□□ 0.67
GCDH-213ENST00000590627 ZMYND8Q9ULU4 1186 aaPredicted RBP19.24■□□□□ 0.67
GCDH-213ENST00000590627 IVNS1ABPQ9Y6Y0 642 aa19.24■□□□□ 0.67
GCDH-213ENST00000590627 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
GCDH-213ENST00000590627 CTDNEP1O95476 244 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 BMP3P12645 472 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 IFNAR1P17181 557 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 FUT2Q10981 343 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 MFSD14CQ5VZR4 134 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 CPLX2Q6PUV4 134 aaKnown RBP19.23■□□□□ 0.67
GCDH-213ENST00000590627 RASGRP2Q7LDG7 609 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 STAG2Q8N3U4 1231 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 BTBD7Q9P203 1132 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 MTMR7Q9Y216 660 aa19.23■□□□□ 0.67
GCDH-213ENST00000590627 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.23■□□□□ 0.67
GCDH-213ENST00000590627 SOX1O00570 391 aaPredicted RBP19.22■□□□□ 0.67
GCDH-213ENST00000590627 CPLX1O14810 134 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 WDR46O15213 610 aaKnown RBP19.22■□□□□ 0.67
GCDH-213ENST00000590627 PLA2G6O60733 806 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 CDKL5O76039 1030 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 GRB14Q14449 540 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 WDR78Q5VTH9 848 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 BTNL9Q6UXG8 535 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 NSUN7Q8NE18 718 aaKnown RBP19.22■□□□□ 0.67
GCDH-213ENST00000590627 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 HOXC10Q9NYD6 342 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 FRMPD3Q5JV73 1810 aa19.22■□□□□ 0.67
GCDH-213ENST00000590627 KLRF2D3W0D1 207 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 MSCO60682 206 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 PLEKHA8P1O95397 391 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 GOLGA8HP0CJ92 632 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 COG2Q14746 738 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 CCDC96Q2M329 555 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 GPR153Q6NV75 609 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 SPICE1Q8N0Z3 855 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 SRBD1Q8N5C6 995 aaKnown RBP19.21■□□□□ 0.67
GCDH-213ENST00000590627 SPZ1Q9BXG8 430 aa19.21■□□□□ 0.67
GCDH-213ENST00000590627 RAD21O60216 631 aa19.2■□□□□ 0.66
GCDH-213ENST00000590627 SYN1P17600 705 aa19.2■□□□□ 0.66
GCDH-213ENST00000590627 FAM83BQ5T0W9 1011 aa19.2■□□□□ 0.66
GCDH-213ENST00000590627 KCTD1Q719H9 257 aa19.2■□□□□ 0.66
GCDH-213ENST00000590627 LRCH3Q96II8 777 aa19.2■□□□□ 0.66
GCDH-213ENST00000590627 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
GCDH-213ENST00000590627 RIOX1Q9H6W3 641 aa19.2■□□□□ 0.66
GCDH-213ENST00000590627 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
GCDH-213ENST00000590627 DAXXQ9UER7 740 aaPredicted RBP19.2■□□□□ 0.66
GCDH-213ENST00000590627 FRMPD2Q68DX3 1309 aaPredicted RBP19.2■□□□□ 0.66
GCDH-213ENST00000590627 ZNF236Q9UL36 1845 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 PTPDC1A2A3K4 754 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 STRNO43815 780 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 HSP90AA1P07900 732 aaKnown RBP19.19■□□□□ 0.66
GCDH-213ENST00000590627 MAGEA10P43363 369 aaPredicted RBP19.19■□□□□ 0.66
GCDH-213ENST00000590627 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 HMGN5P82970 282 aaKnown RBP19.19■□□□□ 0.66
GCDH-213ENST00000590627 SLC35G1Q2M3R5 365 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 TTBK2Q6IQ55 1244 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 RNF26Q9BY78 433 aaPredicted RBP19.19■□□□□ 0.66
GCDH-213ENST00000590627 GPCPD1Q9NPB8 672 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 DDX20Q9UHI6 824 aaKnown RBP19.19■□□□□ 0.66
GCDH-213ENST00000590627 FEM1BQ9UK73 627 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 STK36Q9NRP7 1315 aa19.19■□□□□ 0.66
GCDH-213ENST00000590627 RLFQ13129 1914 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
GCDH-213ENST00000590627 CYTH3O43739 400 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 IGHA2P01877 340 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 LRIT3Q3SXY7 679 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 FAM160B2Q86V87 743 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 TDHQ8IZJ6 230 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 MB21D1Q8N884 522 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 SHCBP1Q8NEM2 672 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 NPLOC4Q8TAT6 608 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 CHURC1Q8WUH1 139 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 MOV10L1Q9BXT6 1211 aaKnown RBP19.18■□□□□ 0.66
GCDH-213ENST00000590627 SMC3Q9UQE7 1217 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 CNTNAP5Q8WYK1 1306 aa19.18■□□□□ 0.66
GCDH-213ENST00000590627 TMEM232C9JQI7 657 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 JAK2O60674 1132 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 STAT2P52630 851 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 SSRP1Q08945 709 aaKnown RBP19.17■□□□□ 0.66
GCDH-213ENST00000590627 LRRC26Q2I0M4 334 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 CMTR1Q8N1G2 835 aaKnown RBP19.17■□□□□ 0.66
GCDH-213ENST00000590627 MTMR8Q96EF0 704 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 TANGO6Q9C0B7 1094 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 UBA5Q9GZZ9 404 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 SPATC1LQ9H0A9 340 aa19.17■□□□□ 0.66
GCDH-213ENST00000590627 FDPSP14324 419 aaKnown RBP19.16■□□□□ 0.66
GCDH-213ENST00000590627 SYDE2Q5VT97 1194 aa19.16■□□□□ 0.66
GCDH-213ENST00000590627 OLFML2BQ68BL8 750 aa19.16■□□□□ 0.66
GCDH-213ENST00000590627 DPP9Q86TI2 863 aa19.16■□□□□ 0.66
GCDH-213ENST00000590627 ADGRF4Q8IZF3 695 aa19.16■□□□□ 0.66
GCDH-213ENST00000590627 PHKBQ93100 1093 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms