RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 SKIV2LQ15477 1246 aaKnown RBP18.04■□□□□ 0.48
SF3A2-204ENST00000589118 SBK1Q52WX2 424 aa18.04■□□□□ 0.48
SF3A2-204ENST00000589118 PPP2R2DQ66LE6 453 aa18.04■□□□□ 0.48
SF3A2-204ENST00000589118 RASGRP2Q7LDG7 609 aa18.04■□□□□ 0.48
SF3A2-204ENST00000589118 TLK2Q86UE8 772 aa18.04■□□□□ 0.48
SF3A2-204ENST00000589118 CHST13Q8NET6 341 aa18.04■□□□□ 0.48
SF3A2-204ENST00000589118 OSBP2Q969R2 916 aa18.04■□□□□ 0.48
SF3A2-204ENST00000589118 A1CFQ9NQ94 594 aaKnown RBP18.04■□□□□ 0.48
SF3A2-204ENST00000589118 FEM1BQ9UK73 627 aa18.04■□□□□ 0.48
SF3A2-204ENST00000589118 PRRC2BQ5JSZ5 2229 aaKnown RBP18.03■□□□□ 0.48
SF3A2-204ENST00000589118 ZNF536O15090 1300 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 EPOPA6NHQ4 379 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 TMEM232C9JQI7 657 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 ARHGEF15O94989 841 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 HNRNPUQ00839 825 aaKnown RBP eCLIP18.03■□□□□ 0.48
SF3A2-204ENST00000589118 TTLL4Q14679 1199 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 FSCN1Q16658 493 aaKnown RBP18.03■□□□□ 0.48
SF3A2-204ENST00000589118 TSHZ3Q63HK5 1081 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 DEFB128Q7Z7B8 93 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 FBXO16Q8IX29 292 aaPredicted RBP18.03■□□□□ 0.48
SF3A2-204ENST00000589118 RPAP2Q8IXW5 612 aaPredicted RBP18.03■□□□□ 0.48
SF3A2-204ENST00000589118 FAM122AQ96E09 287 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 EPHX3Q9H6B9 360 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 RNF146Q9NTX7 359 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 SLC4A7Q9Y6M7 1214 aa18.03■□□□□ 0.48
SF3A2-204ENST00000589118 CYP2C9P11712 490 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 BMP3P12645 472 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 NKX3-2P78367 333 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 MUM1L1Q5H9M0 696 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 TAPT1Q6NXT6 567 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.02■□□□□ 0.48
SF3A2-204ENST00000589118 SPRED2Q7Z698 418 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 ZNF444Q8N0Y2 327 aaPredicted RBP18.02■□□□□ 0.48
SF3A2-204ENST00000589118 MKL1Q969V6 931 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 AP5M1Q9H0R1 490 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 MTMR4Q9NYA4 1195 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 FBXO40Q9UH90 709 aa18.02■□□□□ 0.48
SF3A2-204ENST00000589118 XIRP2A4UGR9 3374 aa18.01■□□□□ 0.47
SF3A2-204ENST00000589118 M0R2C6 588 aa18.01■□□□□ 0.47
SF3A2-204ENST00000589118 RAB11FIP3O75154 756 aa18.01■□□□□ 0.47
SF3A2-204ENST00000589118 ALAS1P13196 640 aa18.01■□□□□ 0.47
SF3A2-204ENST00000589118 TRERF1Q96PN7 1200 aa18.01■□□□□ 0.47
SF3A2-204ENST00000589118 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
SF3A2-204ENST00000589118 ZBTB40Q9NUA8 1239 aa18.01■□□□□ 0.47
SF3A2-204ENST00000589118 TRMT13Q9NUP7 481 aaKnown RBP18.01■□□□□ 0.47
SF3A2-204ENST00000589118 CA3P07451 260 aa18■□□□□ 0.47
SF3A2-204ENST00000589118 ATP2A2P16615 1042 aaKnown RBP18■□□□□ 0.47
SF3A2-204ENST00000589118 ZSCAN25Q6NSZ9 544 aa18■□□□□ 0.47
SF3A2-204ENST00000589118 KHSRPQ92945 711 aaKnown RBP eCLIP18■□□□□ 0.47
SF3A2-204ENST00000589118 MTIF3Q9H2K0 278 aaKnown RBP18■□□□□ 0.47
SF3A2-204ENST00000589118 INCENPQ9NQS7 918 aa18■□□□□ 0.47
SF3A2-204ENST00000589118 MTMR7Q9Y216 660 aa18■□□□□ 0.47
SF3A2-204ENST00000589118 PCDHA11Q9Y5I1 949 aa18■□□□□ 0.47
SF3A2-204ENST00000589118 MTCH2Q9Y6C9 303 aa18■□□□□ 0.47
SF3A2-204ENST00000589118 HMMRO75330 724 aa17.99■□□□□ 0.47
SF3A2-204ENST00000589118 APPP05067 770 aa17.99■□□□□ 0.47
SF3A2-204ENST00000589118 MCCP23508 829 aa17.99■□□□□ 0.47
SF3A2-204ENST00000589118 TDO2P48775 406 aa17.99■□□□□ 0.47
SF3A2-204ENST00000589118 IKQ13123 557 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-204ENST00000589118 KCTD1Q719H9 257 aa17.99■□□□□ 0.47
SF3A2-204ENST00000589118 SEC62Q99442 399 aaKnown RBP17.99■□□□□ 0.47
SF3A2-204ENST00000589118 PTPRSQ13332 1948 aa17.99■□□□□ 0.47
SF3A2-204ENST00000589118 GPAA1O43292 621 aa17.98■□□□□ 0.47
SF3A2-204ENST00000589118 TTLL1O95922 423 aa17.98■□□□□ 0.47
SF3A2-204ENST00000589118 OAZ1P54368 228 aa17.98■□□□□ 0.47
SF3A2-204ENST00000589118 KIAA1211Q6ZU35 1233 aa17.98■□□□□ 0.47
SF3A2-204ENST00000589118 MIER1Q8N108 512 aa17.98■□□□□ 0.47
SF3A2-204ENST00000589118 GMCL1P1Q8NEA9 526 aa17.98■□□□□ 0.47
SF3A2-204ENST00000589118 ALDH8A1Q9H2A2 487 aaPredicted RBP17.98■□□□□ 0.47
SF3A2-204ENST00000589118 TSPYL2Q9H2G4 693 aaPredicted RBP17.98■□□□□ 0.47
SF3A2-204ENST00000589118 ASB14A6NK59 587 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 NMT2O60551 498 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 CABYRO75952 493 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 TFAP4Q01664 338 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 NSMFQ6X4W1 530 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 RPUSD2Q8IZ73 545 aaKnown RBP17.97■□□□□ 0.47
SF3A2-204ENST00000589118 IFNL3Q8IZI9 196 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 LRFN3Q9BTN0 628 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 CYP39A1Q9NYL5 469 aa17.97■□□□□ 0.47
SF3A2-204ENST00000589118 TET1Q8NFU7 2136 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 RNF113AO15541 343 aaKnown RBP17.96■□□□□ 0.47
SF3A2-204ENST00000589118 MYL3P08590 195 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 STAT2P52630 851 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 IQSEC1Q6DN90 963 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 TMCO2Q7Z6W1 182 aaPredicted RBP17.96■□□□□ 0.47
SF3A2-204ENST00000589118 NEDD1Q8NHV4 660 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 STAG1Q8WVM7 1258 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 APPBP2Q92624 585 aa17.96■□□□□ 0.47
SF3A2-204ENST00000589118 TRIP12Q14669 1992 aaPredicted RBP17.95■□□□□ 0.46
SF3A2-204ENST00000589118 FAM86C2PA6NEL3 165 aa17.95■□□□□ 0.46
SF3A2-204ENST00000589118 ERC2O15083 957 aa17.95■□□□□ 0.46
SF3A2-204ENST00000589118 ZEB2O60315 1214 aa17.95■□□□□ 0.46
SF3A2-204ENST00000589118 SLC1A4P43007 532 aa17.95■□□□□ 0.46
SF3A2-204ENST00000589118 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
SF3A2-204ENST00000589118 GIMAP6Q6P9H5 292 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms