RNA–Protein interactions for RNA: ENST00000588980.5

U2AF1L4-211, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-211	ENST00000588980	SLF1	Q9BQI6	1058 aa		13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	TTC12	Q9H892	705 aa	Predicted RBP	13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	FLOT1	O75955	427 aa		13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	HEATR3	Q7Z4Q2	680 aa		13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	RASAL3	Q86YV0	1011 aa		13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	CREBRF	Q8IUR6	639 aa		13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	PRPF38A	Q8NAV1	312 aa	Known RBP	13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	WASF1	Q92558	559 aa		13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	DDX41	Q9UJV9	622 aa	Known RBP	13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	PPP1R9A	Q9ULJ8	1098 aa		13.97	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	SMCHD1	A6NHR9	2005 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	TMEM88B	A6NKF7	163 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L15	C9J2P7	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L13	C9JLJ4	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L11	C9JVI0	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L18	D6R9N7	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L22	D6RA61	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L17	D6RBQ6	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L19	D6RCP7	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L20	D6RJB6	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	ZNF157	P51786	506 aa	Predicted RBP	13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	USP17L24	Q0WX57	530 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	SNAPC2	Q13487	334 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	RGMB	Q6NW40	437 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	FERMT3	Q86UX7	667 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	TMEM87A	Q8NBN3	555 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	BRI3BP	Q8WY22	251 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	ATG4C	Q96DT6	458 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	CHAMP1	Q96JM3	812 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	RANBP17	Q9H2T7	1088 aa	Known RBP	13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	BARHL2	Q9NY43	387 aa		13.96	□□□□□ -0.17
U2AF1L4-211	ENST00000588980	ZNF536	O15090	1300 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	ZSCAN22	P10073	491 aa	Predicted RBP	13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	HOXA7	P31268	230 aa	Predicted RBP	13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	OXER1	Q8TDS5	423 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	PHF20	Q9BVI0	1012 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	SEC63	Q9UGP8	760 aa	Known RBP	13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	ADAMTS5	Q9UNA0	930 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	LOC285556	D6RIA3	1793 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	PARP14	Q460N5	1801 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	KIF28P	B7ZC32	967 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980		H3BQV1	296 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	ZBTB48	P10074	688 aa	Predicted RBP	13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	DSG3	P32926	999 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	COG2	Q14746	738 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	CCDC183	Q5T5S1	534 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	IFFO2	Q5TF58	517 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	CCDC174	Q6PII3	467 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	P2RX7	Q99572	595 aa	Known RBP	13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	USP25	Q9UHP3	1055 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	AGTPBP1	Q9UPW5	1226 aa		13.95	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	WDR33	Q9C0J8	1336 aa	Known RBP	13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	FAM155A	B1AL88	458 aa	Predicted RBP	13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	VWA5A	O00534	786 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	PEX10	O60683	326 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	MMP1	P03956	469 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	GTF2A2	P52657	109 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	IRX5	P78411	483 aa	Predicted RBP	13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	FASTKD5	Q7L8L6	764 aa	Known RBP	13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	REPS2	Q8NFH8	660 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	PTPN18	Q99952	460 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	SLC38A10	Q9HBR0	1119 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	SH3GLB2	Q9NR46	395 aa		13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	ABT1	Q9ULW3	272 aa	Known RBP	13.94	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	CCL15-CCL14	A0A0B4J2E2	113 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	BTBD19	C9JJ37	291 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	F13A1	P00488	732 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	CETP	P11597	493 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	CDK11B	P21127	795 aa	Known RBP	13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	NCBP1	Q09161	790 aa	Known RBP	13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	REST	Q13127	1097 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	CCL15	Q16663	113 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	FAM173B	Q6P4H8	233 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	AGBL1	Q96MI9	1066 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	PCDHA1	Q9Y5I3	950 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	BTBD18	B2RXH4	712 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	SLC10A3	P09131	477 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	KIF23	Q02241	960 aa	Predicted RBP	13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	USH1G	Q495M9	461 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	NOM1	Q5C9Z4	860 aa	Known RBP	13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	FBXO11	Q86XK2	927 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	RGS22	Q8NE09	1264 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	TIGD1	Q96MW7	591 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	ZIC5	Q96T25	663 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	AMN	Q9BXJ7	453 aa		13.93	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	SMTNL1	A8MU46	457 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	OPLAH	O14841	1288 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	NAPA	P54920	295 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	NLRP5	P59047	1200 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	NR5A1	Q13285	461 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	TRIM29	Q14134	588 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	TERF2	Q15554	542 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	DIS3L2	Q8IYB7	885 aa	Known RBP	13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	ZMYND12	Q9H0C1	365 aa		13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	RAVER2	Q9HCJ3	691 aa	Known RBP	13.92	□□□□□ -0.18
U2AF1L4-211	ENST00000588980	HOXC10	Q9NYD6	342 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms