RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 HOMER2Q9NSB8 354 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 RNF146Q9NTX7 359 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 MRPL11Q9Y3B7 192 aaKnown RBP12.85□□□□□ -0.35
CDK3-204ENST00000588812 PCDHA1Q9Y5I3 950 aa12.85□□□□□ -0.35
CDK3-204ENST00000588812 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
CDK3-204ENST00000588812 PPP1R11O60927 126 aaPredicted RBP12.84□□□□□ -0.35
CDK3-204ENST00000588812 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
CDK3-204ENST00000588812 PTPREP23469 700 aa12.84□□□□□ -0.35
CDK3-204ENST00000588812 KCTD2Q14681 263 aa12.84□□□□□ -0.35
CDK3-204ENST00000588812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDK3-204ENST00000588812 PHKBQ93100 1093 aa12.84□□□□□ -0.35
CDK3-204ENST00000588812 TMX3Q96JJ7 454 aa12.84□□□□□ -0.35
CDK3-204ENST00000588812 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
CDK3-204ENST00000588812 ARHGAP39Q9C0H5 1083 aa12.84□□□□□ -0.35
CDK3-204ENST00000588812 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 hCG_1984214I3L0E3 225 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
CDK3-204ENST00000588812 CTGFP29279 349 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 PRMT2P55345 433 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 PFKFB3Q16875 520 aaPredicted RBP12.83□□□□□ -0.36
CDK3-204ENST00000588812 MCF2L2Q86YR7 1114 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 ANKRD35Q8N283 1001 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 ZNF713Q8N859 430 aaPredicted RBP12.83□□□□□ -0.36
CDK3-204ENST00000588812 RGS22Q8NE09 1264 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 SOCS4Q8WXH5 440 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 SNX21Q969T3 373 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 MMP19Q99542 508 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 NUDT12Q9BQG2 462 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 LLPHQ9BRT6 129 aaKnown RBP12.83□□□□□ -0.36
CDK3-204ENST00000588812 PFASO15067 1338 aa12.83□□□□□ -0.36
CDK3-204ENST00000588812 DEXIO95424 95 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 SCG2P13521 617 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 GRB14Q14449 540 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 MUM1L1Q5H9M0 696 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 MORN1Q5T089 497 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 HEATR3Q7Z4Q2 680 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 CLEC4DQ8WXI8 215 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 WASF1Q92558 559 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 BARHL2Q9NY43 387 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 SLC5A4Q9NY91 659 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 SRRDQ9UH36 339 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 TRIM17Q9Y577 477 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 STK36Q9NRP7 1315 aa12.82□□□□□ -0.36
CDK3-204ENST00000588812 NFIBO00712 420 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 ADORA2AP29274 412 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 RGS2P41220 211 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 CAP1Q01518 475 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 PKN1Q16512 942 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 WWC2Q6AWC2 1192 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 NSMFQ6X4W1 530 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 OTOP1Q7RTM1 612 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 CTU1Q7Z7A3 348 aaKnown RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 DPP9Q86TI2 863 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 TEX2Q8IWB9 1127 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 NSUN7Q8NE18 718 aaKnown RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 CCDC12Q8WUD4 166 aaPredicted RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 A1CFQ9NQ94 594 aaKnown RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 MAP3K20Q9NYL2 800 aaKnown RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
CDK3-204ENST00000588812 GJD2Q9UKL4 321 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 MYH6P13533 1939 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 CASP8AP2Q9UKL3 1982 aa12.81□□□□□ -0.36
CDK3-204ENST00000588812 MGAMO43451 1857 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 PTPDC1A2A3K4 754 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
CDK3-204ENST00000588812 HOXC6P09630 235 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 XRCC5P13010 732 aaKnown RBP12.8□□□□□ -0.36
CDK3-204ENST00000588812 FLT3LGP49771 235 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 NAPAP54920 295 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
CDK3-204ENST00000588812 PRKCZQ05513 592 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 MAP2K5Q13163 448 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 PKN2Q16513 984 aaKnown RBP12.8□□□□□ -0.36
CDK3-204ENST00000588812 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 HSCBQ8IWL3 235 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 USP6NLQ92738 828 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 GPKOWQ92917 476 aaPredicted RBP eCLIP12.8□□□□□ -0.36
CDK3-204ENST00000588812 GLT8D2Q9H1C3 349 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 SH3GLB2Q9NR46 395 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 CYP39A1Q9NYL5 469 aa12.8□□□□□ -0.36
CDK3-204ENST00000588812 DNAJC25-GNG10A0A024R161 153 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
CDK3-204ENST00000588812 STXBP3O00186 592 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 CFBP00751 764 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 XBP1P17861 261 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 MRPL12P52815 198 aaKnown RBP12.79□□□□□ -0.36
CDK3-204ENST00000588812 RPS6P62753 249 aaKnown RBP12.79□□□□□ -0.36
CDK3-204ENST00000588812 GHRHRQ02643 423 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms