RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ADD3Q9UEY8 706 aaKnown RBP22.85■■□□□ 1.25
TPM4-208ENST00000588410 ATP11BQ9Y2G3 1177 aa22.85■■□□□ 1.25
TPM4-208ENST00000588410 RBM8AQ9Y5S9 174 aaKnown RBP22.85■■□□□ 1.25
TPM4-208ENST00000588410 DUSP11O75319 330 aaKnown RBP22.84■■□□□ 1.25
TPM4-208ENST00000588410 RTP1P59025 263 aa22.84■■□□□ 1.25
TPM4-208ENST00000588410 BMP2KLQ5H9B9 411 aa22.84■■□□□ 1.25
TPM4-208ENST00000588410 SLC39A5Q6ZMH5 540 aa22.84■■□□□ 1.25
TPM4-208ENST00000588410 CCDC136Q96JN2 1154 aa22.84■■□□□ 1.25
TPM4-208ENST00000588410 PRKAG2Q9UGJ0 569 aa22.84■■□□□ 1.25
TPM4-208ENST00000588410 PHF24Q9UPV7 400 aa22.84■■□□□ 1.25
TPM4-208ENST00000588410 CALML3P27482 149 aa22.83■■□□□ 1.25
TPM4-208ENST00000588410 SEC23AQ15436 765 aa22.83■■□□□ 1.25
TPM4-208ENST00000588410 CDC37Q16543 378 aaPredicted RBP22.83■■□□□ 1.25
TPM4-208ENST00000588410 USH1GQ495M9 461 aa22.83■■□□□ 1.25
TPM4-208ENST00000588410 RNF207Q6ZRF8 634 aa22.83■■□□□ 1.25
TPM4-208ENST00000588410 NOL8Q76FK4 1167 aaKnown RBP22.83■■□□□ 1.25
TPM4-208ENST00000588410 ADGRF4Q8IZF3 695 aa22.83■■□□□ 1.25
TPM4-208ENST00000588410 CLEC4DQ8WXI8 215 aa22.83■■□□□ 1.25
TPM4-208ENST00000588410 ESYT1Q9BSJ8 1104 aa22.83■■□□□ 1.25
TPM4-208ENST00000588410 SYNRGQ9UMZ2 1314 aa22.82■■□□□ 1.24
TPM4-208ENST00000588410 ADAMTS4O75173 837 aa22.82■■□□□ 1.24
TPM4-208ENST00000588410 SKAP1Q86WV1 359 aa22.82■■□□□ 1.24
TPM4-208ENST00000588410 TSEN34Q9BSV6 310 aaKnown RBP22.82■■□□□ 1.24
TPM4-208ENST00000588410 PRO3102Q9H379 93 aa22.82■■□□□ 1.24
TPM4-208ENST00000588410 VAT1LQ9HCJ6 419 aa22.82■■□□□ 1.24
TPM4-208ENST00000588410 LAMA4Q16363 1823 aa22.81■■□□□ 1.24
TPM4-208ENST00000588410 C6orf222P0C671 652 aaPredicted RBP22.81■■□□□ 1.24
TPM4-208ENST00000588410 TNFAIP2Q03169 654 aa22.81■■□□□ 1.24
TPM4-208ENST00000588410 WTAPQ15007 396 aa22.81■■□□□ 1.24
TPM4-208ENST00000588410 CASC1Q6TDU7 716 aa22.81■■□□□ 1.24
TPM4-208ENST00000588410 PURBQ96QR8 312 aaKnown RBP22.81■■□□□ 1.24
TPM4-208ENST00000588410 MPHOSPH6Q99547 160 aaKnown RBP22.81■■□□□ 1.24
TPM4-208ENST00000588410 KATNBL1Q9H079 304 aa22.81■■□□□ 1.24
TPM4-208ENST00000588410 ANO2Q9NQ90 1003 aa22.81■■□□□ 1.24
TPM4-208ENST00000588410 TAF6LQ9Y6J9 622 aa22.81■■□□□ 1.24
TPM4-208ENST00000588410 A0A1W2PPC1 479 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 NEFLP07196 543 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 MAGEA10P43363 369 aaPredicted RBP22.8■■□□□ 1.24
TPM4-208ENST00000588410 TRIM60Q495X7 471 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 TMEM67Q5HYA8 995 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 SLC30A10Q6XR72 485 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 STOX1Q6ZVD7 989 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 EEPD1Q7L9B9 569 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 NUP133Q8WUM0 1156 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 GDF15Q99988 308 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 LSG1Q9H089 658 aaKnown RBP22.8■■□□□ 1.24
TPM4-208ENST00000588410 ASTN1O14525 1302 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 ABCB11O95342 1321 aa22.8■■□□□ 1.24
TPM4-208ENST00000588410 LOC102724159A0A0B4J2E5 919 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 A0A1W2PQ45 241 aaPredicted RBP22.79■■□□□ 1.24
TPM4-208ENST00000588410 A0A1W2PQY0 241 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 MOXD2PA6NHM9 499 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 KLRF2D3W0D1 207 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 FXR1P51114 621 aaKnown RBP eCLIP22.79■■□□□ 1.24
TPM4-208ENST00000588410 ALDH5A1P51649 535 aaPredicted RBP22.79■■□□□ 1.24
TPM4-208ENST00000588410 ACLYP53396 1101 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 RPS6P62753 249 aaKnown RBP22.79■■□□□ 1.24
TPM4-208ENST00000588410 PWP2Q15269 919 aaKnown RBP22.79■■□□□ 1.24
TPM4-208ENST00000588410 KCNA10Q16322 511 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 CHST3Q7LGC8 479 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 FBXO11Q86XK2 927 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 PCSK9Q8NBP7 692 aaKnown RBP22.79■■□□□ 1.24
TPM4-208ENST00000588410 KLHDC9Q8NEP7 349 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 LBHD1Q9BQE6 289 aaPredicted RBP22.79■■□□□ 1.24
TPM4-208ENST00000588410 JMJD4Q9H9V9 463 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 VTA1Q9NP79 307 aa22.79■■□□□ 1.24
TPM4-208ENST00000588410 DDX49Q9Y6V7 483 aaKnown RBP22.79■■□□□ 1.24
TPM4-208ENST00000588410 BMP8BP34820 402 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 GJA9P57773 515 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 SNX17Q15036 470 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 QRICH1Q2TAL8 776 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 C1orf53Q5VUE5 145 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 MCF2L2Q86YR7 1114 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 FBXO16Q8IX29 292 aaPredicted RBP22.78■■□□□ 1.24
TPM4-208ENST00000588410 STAG2Q8N3U4 1231 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 RGS22Q8NE09 1264 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 AP5M1Q9H0R1 490 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 UPF3AQ9H1J1 476 aaKnown RBP22.78■■□□□ 1.24
TPM4-208ENST00000588410 PRDM5Q9NQX1 630 aaPredicted RBP22.78■■□□□ 1.24
TPM4-208ENST00000588410 STARD7Q9NQZ5 370 aa22.78■■□□□ 1.24
TPM4-208ENST00000588410 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.77■■□□□ 1.24
TPM4-208ENST00000588410 MYADML2A6NDP7 307 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 B4DLN1 442 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 ADCY6O43306 1168 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 CST5P28325 142 aaPredicted RBP22.77■■□□□ 1.24
TPM4-208ENST00000588410 MRPL12P52815 198 aaKnown RBP22.77■■□□□ 1.24
TPM4-208ENST00000588410 PDE4DQ08499 809 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 GNASQ5JWF2 1037 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 IQSEC1Q6DN90 963 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 CATIPQ7Z7H3 387 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 MB21D2Q8IYB1 491 aaPredicted RBP22.77■■□□□ 1.24
TPM4-208ENST00000588410 MORC4Q8TE76 937 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 VTI1AQ96AJ9 217 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 UBE2OQ9C0C9 1292 aaKnown RBP22.77■■□□□ 1.24
TPM4-208ENST00000588410 MAD2L2Q9UI95 211 aa22.77■■□□□ 1.24
TPM4-208ENST00000588410 MRPL11Q9Y3B7 192 aaKnown RBP22.77■■□□□ 1.24
TPM4-208ENST00000588410 ZNFX1Q9P2E3 1918 aaKnown RBP22.76■■□□□ 1.23
TPM4-208ENST00000588410 SLC27A2O14975 620 aa22.76■■□□□ 1.23
TPM4-208ENST00000588410 MDM2Q00987 491 aaPredicted RBP22.76■■□□□ 1.23
TPM4-208ENST00000588410 GRM4Q14833 912 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms