RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 MUM1L1Q5H9M0 696 aa18.8■□□□□ 0.6
ERCC1-206ENST00000588300 RRP12Q5JTH9 1297 aaKnown RBP18.8■□□□□ 0.6
ERCC1-206ENST00000588300 NOL8Q76FK4 1167 aaKnown RBP18.8■□□□□ 0.6
ERCC1-206ENST00000588300 SEMA6BQ9H3T3 888 aa18.8■□□□□ 0.6
ERCC1-206ENST00000588300 CYP39A1Q9NYL5 469 aa18.8■□□□□ 0.6
ERCC1-206ENST00000588300 LCTP09848 1927 aa18.8■□□□□ 0.6
ERCC1-206ENST00000588300 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-206ENST00000588300 TLR3O15455 904 aaKnown RBP18.79■□□□□ 0.6
ERCC1-206ENST00000588300 ICAM1P05362 532 aa18.79■□□□□ 0.6
ERCC1-206ENST00000588300 TOP1P11387 765 aaKnown RBP18.79■□□□□ 0.6
ERCC1-206ENST00000588300 NSMFQ6X4W1 530 aa18.79■□□□□ 0.6
ERCC1-206ENST00000588300 CDX2Q99626 313 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-206ENST00000588300 RANBP17Q9H2T7 1088 aaKnown RBP18.79■□□□□ 0.6
ERCC1-206ENST00000588300 TMEM265A0A087WTH1 108 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 TRIM6-TRIM34B2RNG4 842 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 CTAGE5O15320 804 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
ERCC1-206ENST00000588300 BEX3Q00994 111 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 NMIQ13287 307 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-206ENST00000588300 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-206ENST00000588300 MFSD5Q6N075 450 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 BTNL9Q6UXG8 535 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 TLK2Q86UE8 772 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 TCP11L1Q9NUJ3 509 aa18.78■□□□□ 0.6
ERCC1-206ENST00000588300 GNEQ9Y223 722 aaKnown RBP18.78■□□□□ 0.6
ERCC1-206ENST00000588300 ASTN1O14525 1302 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 CCDC171Q6TFL3 1326 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 CABYRO75952 493 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 PPIGQ13427 754 aaKnown RBP eCLIP18.77■□□□□ 0.61e-6■■■□□ 18.4
ERCC1-206ENST00000588300 AAMPQ13685 434 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 SYDE2Q5VT97 1194 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 TTBK2Q6IQ55 1244 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 ZNF589Q86UQ0 364 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-206ENST00000588300 FAM126BQ8IXS8 530 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 TMEM47Q9BQJ4 181 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 LNPKQ9C0E8 428 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 AP5M1Q9H0R1 490 aa18.77■□□□□ 0.6
ERCC1-206ENST00000588300 TTYH1Q9H313 450 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-206ENST00000588300 ZEB2O60315 1214 aa18.76■□□□□ 0.59
ERCC1-206ENST00000588300 SMPD1P17405 629 aa18.76■□□□□ 0.59
ERCC1-206ENST00000588300 SLC16A2P36021 539 aa18.76■□□□□ 0.59
ERCC1-206ENST00000588300 FSCN1Q16658 493 aaKnown RBP18.76■□□□□ 0.59
ERCC1-206ENST00000588300 IQSEC1Q6DN90 963 aa18.76■□□□□ 0.59
ERCC1-206ENST00000588300 EEPD1Q7L9B9 569 aa18.76■□□□□ 0.59
ERCC1-206ENST00000588300 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.76■□□□□ 0.59
ERCC1-206ENST00000588300 FBXO16Q8IX29 292 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-206ENST00000588300 RILPL2Q969X0 211 aa18.76■□□□□ 0.59
ERCC1-206ENST00000588300 VTA1Q9NP79 307 aa18.76■□□□□ 0.59
ERCC1-206ENST00000588300 ADD3Q9UEY8 706 aaKnown RBP18.76■□□□□ 0.59
ERCC1-206ENST00000588300 FRMPD2Q68DX3 1309 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-206ENST00000588300 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-206ENST00000588300 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-206ENST00000588300 PCP11498 1178 aaKnown RBP18.75■□□□□ 0.59
ERCC1-206ENST00000588300 MFAP1P55081 439 aaKnown RBP18.75■□□□□ 0.59
ERCC1-206ENST00000588300 HAND2P61296 217 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 TAPT1Q6NXT6 567 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 CXCL17Q6UXB2 119 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 MFSD6Q6ZSS7 791 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 TMEM199Q8N511 208 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 MORC4Q8TE76 937 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 MYLIPQ8WY64 445 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.75■□□□□ 0.595e-7■■□□□ 13.9
ERCC1-206ENST00000588300 PPP1R12CQ9BZL4 782 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 GPCPD1Q9NPB8 672 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 PDGFCQ9NRA1 345 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 Q9Y3F1 56 aa18.75■□□□□ 0.59
ERCC1-206ENST00000588300 DDX49Q9Y6V7 483 aaKnown RBP18.75■□□□□ 0.59
ERCC1-206ENST00000588300 A0A0C4DFX4 3053 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 LOC102724159A0A0B4J2E5 919 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 DYNC1LI2O43237 492 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-206ENST00000588300 CD4P01730 458 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 PDHBP11177 359 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 BAATQ14032 418 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-206ENST00000588300 PWP2Q15269 919 aaKnown RBP18.74■□□□□ 0.59
ERCC1-206ENST00000588300 AKNAD1Q5T1N1 836 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 SLC43A3Q8NBI5 491 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 MAFAQ8NHW3 353 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-206ENST00000588300 TTC14Q96N46 770 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 SEZ6LQ9BYH1 1024 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 RWDD1Q9H446 243 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-206ENST00000588300 RNF41Q9H4P4 317 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-206ENST00000588300 PNMA2Q9UL42 364 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 CUL9Q8IWT3 2517 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 LAMA4Q16363 1823 aa18.74■□□□□ 0.59
ERCC1-206ENST00000588300 PTPDC1A2A3K4 754 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 NFIBO00712 420 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 CSF2RAP15509 400 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 DNAJB2P25686 324 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 ALDH5A1P51649 535 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-206ENST00000588300 ITGA7Q13683 1181 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 PSRC1Q6PGN9 363 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-206ENST00000588300 KIAA1211Q6ZU35 1233 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 SMC5Q8IY18 1101 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 PURBQ96QR8 312 aaKnown RBP18.73■□□□□ 0.59
ERCC1-206ENST00000588300 UNC80Q8N2C7 3258 aa18.73■□□□□ 0.59
ERCC1-206ENST00000588300 FOSL2P15408 326 aa18.72■□□□□ 0.59
ERCC1-206ENST00000588300 SDSP20132 328 aa18.72■□□□□ 0.59
ERCC1-206ENST00000588300 PTGS1P23219 599 aa18.72■□□□□ 0.59
ERCC1-206ENST00000588300 ZNF543Q08ER8 600 aa18.72■□□□□ 0.59
ERCC1-206ENST00000588300 TMEM240Q5SV17 173 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms