RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 EEPD1Q7L9B9 569 aa19.97■□□□□ 0.79
TMED1-203ENST00000588259 ZNF589Q86UQ0 364 aaPredicted RBP19.97■□□□□ 0.79
TMED1-203ENST00000588259 TOX2Q96NM4 488 aa19.97■□□□□ 0.79
TMED1-203ENST00000588259 DDX49Q9Y6V7 483 aaKnown RBP19.97■□□□□ 0.79
TMED1-203ENST00000588259 ELP1O95163 1332 aa19.97■□□□□ 0.79
TMED1-203ENST00000588259 CCDC171Q6TFL3 1326 aa19.97■□□□□ 0.79
TMED1-203ENST00000588259 CUL9Q8IWT3 2517 aa19.96■□□□□ 0.79
TMED1-203ENST00000588259 A0A0U1RQG5 324 aaPredicted RBP19.96■□□□□ 0.79
TMED1-203ENST00000588259 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.96■□□□□ 0.79
TMED1-203ENST00000588259 HSPD1P10809 573 aaKnown RBP19.96■□□□□ 0.79
TMED1-203ENST00000588259 EPHB4P54760 987 aa19.96■□□□□ 0.79
TMED1-203ENST00000588259 SYDE2Q5VT97 1194 aa19.96■□□□□ 0.79
TMED1-203ENST00000588259 TLK2Q86UE8 772 aa19.96■□□□□ 0.79
TMED1-203ENST00000588259 AP5M1Q9H0R1 490 aa19.96■□□□□ 0.79
TMED1-203ENST00000588259 RWDD1Q9H446 243 aaPredicted RBP19.96■□□□□ 0.79
TMED1-203ENST00000588259 CYP39A1Q9NYL5 469 aa19.96■□□□□ 0.79
TMED1-203ENST00000588259 ICAM1P05362 532 aa19.95■□□□□ 0.78
TMED1-203ENST00000588259 SMAD3P84022 425 aaKnown RBP19.95■□□□□ 0.78
TMED1-203ENST00000588259 FBXO16Q8IX29 292 aaPredicted RBP19.95■□□□□ 0.78
TMED1-203ENST00000588259 TMEM47Q9BQJ4 181 aa19.95■□□□□ 0.78
TMED1-203ENST00000588259 KATNBL1Q9H079 304 aa19.95■□□□□ 0.78
TMED1-203ENST00000588259 LCTP09848 1927 aa19.95■□□□□ 0.78
TMED1-203ENST00000588259 ARVCFO00192 962 aa19.94■□□□□ 0.78
TMED1-203ENST00000588259 TLR3O15455 904 aaKnown RBP19.94■□□□□ 0.78
TMED1-203ENST00000588259 MFAP1P55081 439 aaKnown RBP19.94■□□□□ 0.78
TMED1-203ENST00000588259 CXCL17Q6UXB2 119 aa19.94■□□□□ 0.78
TMED1-203ENST00000588259 MFSD6Q6ZSS7 791 aa19.94■□□□□ 0.78
TMED1-203ENST00000588259 RANBP17Q9H2T7 1088 aaKnown RBP19.94■□□□□ 0.78
TMED1-203ENST00000588259 TBX21Q9UL17 535 aa19.94■□□□□ 0.78
TMED1-203ENST00000588259 PTPDC1A2A3K4 754 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 TIMP1P01033 207 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 FGRP09769 529 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 FSCN1Q16658 493 aaKnown RBP19.93■□□□□ 0.78
TMED1-203ENST00000588259 AKNAD1Q5T1N1 836 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 PURBQ96QR8 312 aaKnown RBP19.93■□□□□ 0.78
TMED1-203ENST00000588259 PPP1R12CQ9BZL4 782 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 PDGFCQ9NRA1 345 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 DIAPH3Q9NSV4 1193 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 ASTN1O14525 1302 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 ZMYM6O95789 1325 aa19.93■□□□□ 0.78
TMED1-203ENST00000588259 A0A0C4DFX4 3053 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 NFIBO00712 420 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 DYNC1LI2O43237 492 aaPredicted RBP19.92■□□□□ 0.78
TMED1-203ENST00000588259 ZEB2O60315 1214 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 PTGS1P23219 599 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 AAMPQ13685 434 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 BAATQ14032 418 aaPredicted RBP19.92■□□□□ 0.78
TMED1-203ENST00000588259 TICAM2Q86XR7 235 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 TBC1D10CQ8IV04 446 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 CDX2Q99626 313 aaPredicted RBP19.92■□□□□ 0.78
TMED1-203ENST00000588259 SEMA6BQ9H3T3 888 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 RNF41Q9H4P4 317 aaPredicted RBP19.92■□□□□ 0.78
TMED1-203ENST00000588259 ADD3Q9UEY8 706 aaKnown RBP19.92■□□□□ 0.78
TMED1-203ENST00000588259 LAMA4Q16363 1823 aa19.92■□□□□ 0.78
TMED1-203ENST00000588259 CTAGE5O15320 804 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 PDHBP11177 359 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 SMPD1P17405 629 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 SDSP20132 328 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 CALML3P27482 149 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 NOVP48745 357 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 CDK7P50613 346 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 PPIGQ13427 754 aaKnown RBP eCLIP19.91■□□□□ 0.78
TMED1-203ENST00000588259 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 CHD1LQ86WJ1 897 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 FAM126BQ8IXS8 530 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 SMC5Q8IY18 1101 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 ZKSCAN3Q9BRR0 538 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 VTA1Q9NP79 307 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 TCP11L1Q9NUJ3 509 aa19.91■□□□□ 0.78
TMED1-203ENST00000588259 GNEQ9Y223 722 aaKnown RBP19.91■□□□□ 0.78
TMED1-203ENST00000588259 PCP11498 1178 aaKnown RBP19.9■□□□□ 0.78
TMED1-203ENST00000588259 IQSEC1Q6DN90 963 aa19.9■□□□□ 0.78
TMED1-203ENST00000588259 MFSD5Q6N075 450 aa19.9■□□□□ 0.78
TMED1-203ENST00000588259 CWC27Q6UX04 472 aaKnown RBP19.9■□□□□ 0.78
TMED1-203ENST00000588259 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
TMED1-203ENST00000588259 TMEM199Q8N511 208 aa19.9■□□□□ 0.78
TMED1-203ENST00000588259 MYLIPQ8WY64 445 aa19.9■□□□□ 0.78
TMED1-203ENST00000588259 ESR2Q92731 530 aa19.9■□□□□ 0.78
TMED1-203ENST00000588259 NEDD4P46934 1319 aa19.9■□□□□ 0.78
TMED1-203ENST00000588259 ZNF213O14771 459 aa19.89■□□□□ 0.77
TMED1-203ENST00000588259 CABYRO75952 493 aa19.89■□□□□ 0.77
TMED1-203ENST00000588259 CSF2RAP15509 400 aa19.89■□□□□ 0.77
TMED1-203ENST00000588259 ALDH5A1P51649 535 aaPredicted RBP19.89■□□□□ 0.77
TMED1-203ENST00000588259 ZNF543Q08ER8 600 aa19.89■□□□□ 0.77
TMED1-203ENST00000588259 SLC30A10Q6XR72 485 aa19.89■□□□□ 0.77
TMED1-203ENST00000588259 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.89■□□□□ 0.77
TMED1-203ENST00000588259 MAFAQ8NHW3 353 aaPredicted RBP19.89■□□□□ 0.77
TMED1-203ENST00000588259 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.89■□□□□ 0.77
TMED1-203ENST00000588259 TTYH1Q9H313 450 aaPredicted RBP19.89■□□□□ 0.77
TMED1-203ENST00000588259 ACRP10323 421 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 FOSL2P15408 326 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 CYP2C18P33260 490 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 NUCB1Q02818 461 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 ITGA7Q13683 1181 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 USH1GQ495M9 461 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 TAPT1Q6NXT6 567 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 RNF207Q6ZRF8 634 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 PLEKHM2Q8IWE5 1019 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 TTC14Q96N46 770 aa19.88■□□□□ 0.77
TMED1-203ENST00000588259 PNMA2Q9UL42 364 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms