RNA–Protein interactions for RNA: ENST00000588177.1

SOX9-AS1-215, SOX9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene SOX9-AS1, Length 465 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-215ENST00000588177 SNRNP48Q6IEG0 339 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 CYP4F22Q6NT55 531 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 LBX2Q6XYB7 198 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 BRAPQ7Z569 592 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 FERMT3Q86UX7 667 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 DIS3L2Q8IYB7 885 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 BLIDQ8IZY5 108 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 DAGLBQ8NCG7 672 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 TEX13BQ9BXU2 312 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 ZMYND12Q9H0C1 365 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 RAVER2Q9HCJ3 691 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 ZCCHC17Q9NP64 241 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 THSD7BQ9C0I4 1608 aa11.09□□□□□ -0.63
SOX9-AS1-215ENST00000588177 CCDC194A0A1B0GVG4 234 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 RASSF10A6NK89 507 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 FAM155AB1AL88 458 aaPredicted RBP11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 COPB2P35606 906 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 MRPL12P52815 198 aaKnown RBP11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 KIF23Q02241 960 aaPredicted RBP11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 NOGQ13253 232 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TKFCQ3LXA3 575 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 REXO1Q8N1G1 1221 aaKnown RBP11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 FAM43AQ8N2R8 423 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 AGBL1Q96MI9 1066 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 P2RX7Q99572 595 aaKnown RBP11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 FOXP1Q9H334 677 aaPredicted RBP11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 RIC8AQ9NPQ8 531 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ADAMTS5Q9UNA0 930 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 MGAMO43451 1857 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ZNF536O15090 1300 aa11.08□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ZNFX1Q9P2E3 1918 aaKnown RBP11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 PLXNA1Q9UIW2 1896 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 CYP2C8P10632 490 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 STAT3P40763 770 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 GCLCP48506 637 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 RESTQ13127 1097 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TMEM132BQ14DG7 1078 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TAF1CQ15572 869 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 MCTP2Q6DN12 878 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 KRT25Q7Z3Z0 450 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 MCF2L2Q86YR7 1114 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 NOSTRINQ8IVI9 506 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TEX2Q8IWB9 1127 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 REPS2Q8NFH8 660 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TRERF1Q96PN7 1200 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 GBP4Q96PP9 640 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 EHMT1Q9H9B1 1298 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 RNF146Q9NTX7 359 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 NOL7Q9UMY1 257 aaKnown RBP11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 RABGAP1Q9Y3P9 1069 aa11.07□□□□□ -0.64
SOX9-AS1-215ENST00000588177 LCTP09848 1927 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 SPDYE3A6NKU9 549 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 BTBD18B2RXH4 712 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TAL1P17542 331 aaPredicted RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 NCLP19338 710 aaKnown RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 CCNA1P78396 465 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 NR5A1Q13285 461 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 UBE2SQ16763 222 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 FOXD4L6Q3SYB3 417 aaPredicted RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 FOXD4L3Q6VB84 417 aaPredicted RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 CCAR1Q8IX12 1150 aaKnown RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 SHISA4Q96DD7 197 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ZNF396Q96N95 335 aaPredicted RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 SPATC1LQ9H0A9 340 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ACAD9Q9H845 621 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 FBXO40Q9UH90 709 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ZNF214Q9UL59 606 aaPredicted RBP11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ZDHHC9Q9Y397 364 aa11.06□□□□□ -0.64
SOX9-AS1-215ENST00000588177 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 SLC25A27O95847 323 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ALDH1A1P00352 501 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 CFBP00751 764 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 U2AF2P26368 475 aaKnown RBP eCLIP11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ERVK-9P63128 1117 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 ERVK-24P63145 666 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 KRT85P78386 507 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 WDR78Q5VTH9 848 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 JAKMIP3Q5VZ66 844 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 RIOX2Q8IUF8 465 aa11.05□□□□□ -0.64
SOX9-AS1-215ENST00000588177 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms