RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 CNTN2Q02246 1040 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 PKN2Q16513 984 aaKnown RBP11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 CHST13Q8NET6 341 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 CTCFLQ8NI51 663 aaPredicted RBP11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 SH3TC2Q8TF17 1288 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 TRIB2Q92519 343 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 SHISA4Q96DD7 197 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 ZNF274Q96GC6 653 aaPredicted RBP11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 SPZ1Q9BXG8 430 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 A1CFQ9NQ94 594 aaKnown RBP11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 CCPG1Q9ULG6 757 aa11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 MKI67P46013 3256 aaKnown RBP11.34□□□□□ -0.59
CHAF1A-206ENST00000587739 NID2Q14112 1375 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 PNMA6FA0A0J9YX94 578 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 GOLGA8BA8MQT2 603 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 ADCY3O60266 1144 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 CD2BP2O95400 341 aaKnown RBP11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 FCER1AP12319 257 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 XRCC5P13010 732 aaKnown RBP11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 RCAN1P53805 252 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 FGD1P98174 961 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 ST3GAL1Q11201 340 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 ARHGEF6Q15052 776 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 PKN1Q16512 942 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 ME3Q16798 604 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 RTN1Q16799 776 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 TKFCQ3LXA3 575 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 USH1GQ495M9 461 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 FBXO11Q86XK2 927 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 HOMER1Q86YM7 354 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 MMP19Q99542 508 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
CHAF1A-206ENST00000587739 ADAMTS3O15072 1205 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 GRK4P32298 578 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 KIF5BP33176 963 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 GNAQP50148 359 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 METAP2P50579 478 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 SCRN1Q12765 414 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 STK3Q13188 491 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 MTFR1Q15390 333 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 SYNE3Q6ZMZ3 975 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 TRPV1Q8NER1 839 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 PXYLP1Q8TE99 480 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 ARMC5Q96C12 935 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 MAML3Q96JK9 1138 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 LZTS2Q9BRK4 669 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 ACAD9Q9H845 621 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 COL20A1Q9P218 1284 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 MYH6P13533 1939 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 CEP290O15078 2479 aa11.32□□□□□ -0.6
CHAF1A-206ENST00000587739 RBBP6Q7Z6E9 1792 aaKnown RBP11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 LCTP09848 1927 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 DHX16O60231 1041 aaKnown RBP11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 PFKFB2O60825 505 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 COPB2P35606 906 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 RGS2P41220 211 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 PRAMEF19Q5SWL8 479 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 DPP9Q86TI2 863 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 RGS22Q8NE09 1264 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 PHKBQ93100 1093 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 ZNF333Q96JL9 665 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 PCDHA1Q9Y5I3 950 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
CHAF1A-206ENST00000587739 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 SNAI1O95863 264 aaPredicted RBP11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 IFNAR1P17181 557 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 CYP2C19P33261 490 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 RPS6P62753 249 aaKnown RBP11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 GHRHRQ02643 423 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 CACNB2Q08289 660 aaPredicted RBP11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 KCTD2Q14681 263 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 PPP2R5BQ15173 497 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 MAP3K21Q5TCX8 1036 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 NSMFQ6X4W1 530 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
CHAF1A-206ENST00000587739 SYTL5Q8TDW5 730 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms