RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 PCDHA8Q9Y5H6 950 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 ABCB11O95342 1321 aa20.79■□□□□ 0.92
DDX39A-206ENST00000587730 RNF225M0QZC1 329 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-206ENST00000587730 FGFR1OPO95684 399 aaKnown RBP20.78■□□□□ 0.92
DDX39A-206ENST00000587730 TRIM21P19474 475 aaKnown RBP20.78■□□□□ 0.92
DDX39A-206ENST00000587730 SMARCA1P28370 1054 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 CDC25AP30304 524 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 TFAP4Q01664 338 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 FKBP15Q5T1M5 1219 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 DZIP1Q86YF9 867 aaKnown RBP20.78■□□□□ 0.92
DDX39A-206ENST00000587730 CHP1Q99653 195 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 C7orf25Q9BPX7 421 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 MCM9Q9NXL9 1143 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 MKRN1Q9UHC7 482 aaKnown RBP20.78■□□□□ 0.92
DDX39A-206ENST00000587730 CNNM4Q6P4Q7 775 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 ERGIC2Q96RQ1 377 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 TTYH3Q9C0H2 523 aa20.78■□□□□ 0.92
DDX39A-206ENST00000587730 FAM205AQ6ZU69 1335 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 PES1O00541 588 aaKnown RBP20.77■□□□□ 0.92
DDX39A-206ENST00000587730 BAG3O95817 575 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 GNA11P29992 359 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 ITIH3Q06033 890 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 BARGINQ6ZT62 677 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 ARHGAP27Q6ZUM4 889 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 ZSCAN29Q8IWY8 852 aaPredicted RBP20.77■□□□□ 0.92
DDX39A-206ENST00000587730 WDR66Q8TBY9 1149 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 SPZ1Q9BXG8 430 aa20.77■□□□□ 0.92
DDX39A-206ENST00000587730 STXBP3O00186 592 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 OR52Z1P0C646 297 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 HERVK_113P62684 666 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 TBC1D8BQ0IIM8 1120 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 SPA17Q15506 151 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 WDR59Q6PJI9 974 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 FOXR2Q6PJQ5 311 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 CABP7Q86V35 215 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 NLRP3Q96P20 1036 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 MKNK2Q9HBH9 465 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 MAD2L2Q9UI95 211 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 MYH13Q9UKX3 1938 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 A0A0G2JS52 829 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 USO1O60763 962 aaKnown RBP20.76■□□□□ 0.91
DDX39A-206ENST00000587730 HNRNPH3P31942 346 aaKnown RBP20.76■□□□□ 0.91
DDX39A-206ENST00000587730 KIF5AQ12840 1032 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 NOA1Q8NC60 698 aaKnown RBP20.76■□□□□ 0.91
DDX39A-206ENST00000587730 CCDC102AQ96A19 550 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 PURBQ96QR8 312 aaKnown RBP20.76■□□□□ 0.91
DDX39A-206ENST00000587730 ZMYND12Q9H0C1 365 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 C6orf50Q9HD87 102 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 MAPK8IP1Q9UQF2 711 aa20.76■□□□□ 0.91
DDX39A-206ENST00000587730 TRIM49BA6NDI0 452 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 hCG_1984214I3L0E3 225 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 PRLRP16471 622 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 CAPN2P17655 700 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 RAD51AP2Q09MP3 1159 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 NONOQ15233 471 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDX39A-206ENST00000587730 NCAPH2Q6IBW4 605 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 HEATR3Q7Z4Q2 680 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 ZNF444Q8N0Y2 327 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-206ENST00000587730 ZNF713Q8N859 430 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-206ENST00000587730 TRIM58Q8NG06 486 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 CELF1Q92879 486 aaKnown RBP20.75■□□□□ 0.91
DDX39A-206ENST00000587730 LRRC27Q9C0I9 530 aa20.75■□□□□ 0.91
DDX39A-206ENST00000587730 PALM3A6NDB9 673 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 LDHCP07864 332 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 TSPY3P0CV98 308 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 TSPY8P0CW00 308 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 VAV2P52735 878 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 CCDC84Q86UT8 332 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 GPKOWQ92917 476 aaPredicted RBP eCLIP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 CNOT6LQ96LI5 555 aaKnown RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 DUSP9Q99956 384 aaKnown RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 TRIM9Q9C026 710 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 NHEJ1Q9H9Q4 299 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 CNTNAP4Q9C0A0 1308 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 COL5A3P25940 1745 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 B4DLN1 442 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 COBLO75128 1261 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 CYP2D6P10635 497 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 MTIF2P46199 727 aaKnown RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 PMS1P54277 932 aaKnown RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 PPP4CP60510 307 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 IRX5P78411 483 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 SF3B2Q13435 895 aaKnown RBP20.74■□□□□ 0.91
DDX39A-206ENST00000587730 INF2Q27J81 1249 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 CALML4Q96GE6 196 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 TMEM60Q9H2L4 133 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 IL17RBQ9NRM6 502 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 STK17AQ9UEE5 414 aa20.74■□□□□ 0.91
DDX39A-206ENST00000587730 CASZ1Q86V15 1759 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 COL4A1P02462 1669 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 ABL1P00519 1130 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 PRDX5P30044 214 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 PDE4DQ08499 809 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 C3orf67Q6ZVT6 689 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 ZNF572Q7Z3I7 529 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-206ENST00000587730 CAGE1Q8TC20 777 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 SECISBP2LQ93073 1101 aaKnown RBP20.73■□□□□ 0.91
DDX39A-206ENST00000587730 NOC4LQ9BVI4 516 aaKnown RBP20.73■□□□□ 0.91
DDX39A-206ENST00000587730 EDEM3Q9BZQ6 932 aa20.73■□□□□ 0.91
DDX39A-206ENST00000587730 FAN1Q9Y2M0 1017 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms