RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 TATDN1Q6P1N9 297 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 BLOC1S2Q6QNY1 142 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 CYB5R4Q7L1T6 521 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 CLEC10AQ8IUN9 316 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 MB21D2Q8IYB1 491 aaPredicted RBP9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 ADAMTS19Q8TE59 1207 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 TCEANC2Q96MN5 208 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 ZKSCAN3Q9BRR0 538 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 UPF3BQ9BZI7 483 aaKnown RBP9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 SENP6Q9GZR1 1112 aaPredicted RBP9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 CABP5Q9NP86 173 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 PARP14Q460N5 1801 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 SYNGAP1Q96PV0 1343 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 PRC1O43663 620 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 TRAK2O60296 914 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 NMT2O60551 498 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 NDUFV2P19404 249 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 MCM5P33992 734 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 CAP2P40123 477 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 RTP1P59025 263 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 JAG1P78504 1218 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 FGD1P98174 961 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 ATP2B2Q01814 1243 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 SEPT2Q15019 361 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 RAB3GAP1Q15042 981 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 CCL14Q16627 93 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 POTEEQ6S8J3 1075 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 BANK1Q8NDB2 785 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 CCDC17Q96LX7 622 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 UBAC1Q9BSL1 405 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 LRRC2Q9BYS8 371 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 ZSWIM5Q9P217 1185 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 ZBTB21Q9ULJ3 1066 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 CYP46A1Q9Y6A2 500 aa9.88□□□□□ -0.83
NEDD4L-218ENST00000587547 COL11A1P12107 1806 aaPredicted RBP9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 IFIT3O14879 490 aaKnown RBP9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 CTNND1O60716 968 aaKnown RBP9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 HMGB1P09429 215 aaKnown RBP9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 GCLCP48506 637 aaPredicted RBP9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 ANTXR2P58335 489 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 TMEM179Q6ZVK1 233 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 RUFY3Q7L099 469 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 IQCA1Q86XH1 822 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 NEDD1Q8NHV4 660 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 BADQ92934 168 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 POM121Q96HA1 1249 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 UHRF1Q96T88 793 aaPredicted RBP9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 ASCC2Q9H1I8 757 aaPredicted RBP9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 PRKAG2Q9UGJ0 569 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 SMCHD1A6NHR9 2005 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 PLIN4Q96Q06 1357 aa9.87□□□□□ -0.83
NEDD4L-218ENST00000587547 TNKSO95271 1327 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 LOC285556D6RIA3 1793 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 ERICH2A1L162 156 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 ASNSP08243 561 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 XRCC5P13010 732 aaKnown RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 RPS6KB1P23443 525 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 GUCY1A2P33402 732 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 NEK4P51957 841 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 ICA1Q05084 483 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 SART3Q15020 963 aaKnown RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 RABEP1Q15276 862 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 TMEM259Q4ZIN3 620 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 TMEM67Q5HYA8 995 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 NOL8Q76FK4 1167 aaKnown RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 DHX32Q7L7V1 743 aaKnown RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 PPM1EQ8WY54 764 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 CEP95Q96GE4 821 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 NECAB3Q96P71 396 aaPredicted RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 ASB2Q96Q27 587 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 ZSCAN10Q96SZ4 725 aaPredicted RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 KIF2CQ99661 725 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 TM6SF1Q9BZW5 370 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 PRDM5Q9NQX1 630 aaPredicted RBP9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 PDRG1Q9NUG6 133 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 ATP11BQ9Y2G3 1177 aa9.86□□□□□ -0.83
NEDD4L-218ENST00000587547 RAD21O60216 631 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 HMGCS2P54868 508 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 EXOSC10Q01780 885 aaKnown RBP9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 WTAPQ15007 396 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 QPCTQ16769 361 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 CCDC178Q5BJE1 867 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 NFXL1Q6ZNB6 911 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 Q6ZUG5 572 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 ENAHQ8N8S7 591 aaPredicted RBP9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 ATXN2LQ8WWM7 1075 aaKnown RBP9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 SOCS4Q8WXH5 440 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 USP6NLQ92738 828 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 CHMP4CQ96CF2 233 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 NUDT12Q9BQG2 462 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 SLC4A5Q9BY07 1137 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 KANSL2Q9H9L4 492 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 TXNRD2Q9NNW7 524 aa9.85□□□□□ -0.83
NEDD4L-218ENST00000587547 IL17RBQ9NRM6 502 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms