RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 GJC1P36383 396 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 POLR2FP61218 127 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 VSNL1P62760 191 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 IFFO1Q0D2I5 559 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 RBM26Q5T8P6 1007 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 FOXR1Q6PIV2 292 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 SYCP3Q8IZU3 236 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 CCDC155Q8N6L0 562 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 TUBE1Q9UJT0 475 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 NDUFA10O95299 355 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 ABCB4P21439 1286 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 TXNRD1Q16881 649 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 GIMAP7Q8NHV1 300 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 CTNNBL1Q8WYA6 563 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
CACNA1A-209ENST00000587525 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 TCP11X2Q5H9J9 407 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 MXD3Q9BW11 206 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 LUC7LQ9NQ29 371 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 SASH3O75995 380 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 PDE6BP35913 854 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 IQCEQ6IPM2 695 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 FAM196AQ6ZSG2 479 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 OR52Z1P0C646 297 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 EHHADHQ08426 723 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 RABGGTAQ92696 567 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 SCAF8Q9UPN6 1271 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 PHLPP2Q6ZVD8 1323 aa15.28■□□□□ 0.04
CACNA1A-209ENST00000587525 LOC102724159A0A0B4J2E5 919 aa15.27■□□□□ 0.04
CACNA1A-209ENST00000587525 PRPF3O43395 683 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-209ENST00000587525 NFIXQ14938 502 aa15.27■□□□□ 0.04
CACNA1A-209ENST00000587525 PWP2Q15269 919 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-209ENST00000587525 PTF1AQ7RTS3 328 aa15.27■□□□□ 0.04
CACNA1A-209ENST00000587525 INTS13Q9NVM9 706 aa15.27■□□□□ 0.04
CACNA1A-209ENST00000587525 ACTN4O43707 911 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 GOLGA5Q8TBA6 731 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 ABHD10Q9NUJ1 306 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L5A8MUK1 530 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 NDUFAB1O14561 156 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 CEP104O60308 925 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 UBE4AQ14139 1066 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 CCDC25Q86WR0 208 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 FAM76AQ8TAV0 307 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 AGXT2Q9BYV1 514 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 VEZTQ9HBM0 779 aa15.27■□□□□ 0.03
CACNA1A-209ENST00000587525 GOLGA6CA6NDK9 693 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 GYPCP04921 128 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 ATP1A1P05023 1023 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 PLEKP08567 350 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 GOLGA6DP0CG33 693 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 PRR16Q569H4 304 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 C8orf74Q6P047 294 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 BCAS4Q8TDM0 211 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 GOLGA6AQ9NYA3 693 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 KIAA1024Q9UPX6 916 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 JRKLQ9Y4A0 524 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 SALL1Q9NSC2 1324 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 BICDL2A1A5D9 508 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 CASP8Q14790 479 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 OTUD6BQ8N6M0 293 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 TMEM47Q9BQJ4 181 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 GOLPH3Q9H4A6 298 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 HOMER2Q9NSB8 354 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 GOLGA6BA6NDN3 693 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 HSF2BPO75031 334 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 RNF40O75150 1001 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 TBCAO75347 108 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 ARHGAP44Q17R89 818 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 NEK8Q86SG6 692 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 TRIML1Q8N9V2 468 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 SCLT1Q96NL6 688 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 LSM14BQ9BX40 385 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 HYOU1Q9Y4L1 999 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 RGPD8O14715 1765 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-209ENST00000587525 ADAMTSL3P82987 1691 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 POTEB2H3BUK9 544 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 CFBP00751 764 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 EIF4A3P38919 411 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 SLC1A4P43007 532 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
CACNA1A-209ENST00000587525 USP17L6PQ6QN14 398 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms