RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PCDHA1Q9Y5I3 950 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 PCNTO95613 3336 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 FDX1P10109 184 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 RESTQ13127 1097 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 MB21D1Q8N884 522 aa17.16■□□□□ 0.34
NFIX-208ENST00000587260 ALAS1P13196 640 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.34
NFIX-208ENST00000587260 MAP2K2P36507 400 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 CRHR2Q13324 411 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 GALNT17Q6IS24 598 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
NFIX-208ENST00000587260 TEX13BQ9BXU2 312 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 CPA4Q9UI42 421 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
NFIX-208ENST00000587260 ADGRA2Q96PE1 1338 aa17.14■□□□□ 0.34
NFIX-208ENST00000587260 ESYT2A0FGR8 921 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 OAZ1P54368 228 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 SAFBQ15424 915 aaKnown RBP eCLIP17.14■□□□□ 0.33
NFIX-208ENST00000587260 NPY5RQ15761 445 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
NFIX-208ENST00000587260 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
NFIX-208ENST00000587260 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
NFIX-208ENST00000587260 SPATC1LQ9H0A9 340 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
NFIX-208ENST00000587260 RABGAP1Q9Y3P9 1069 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 RIPK3Q9Y572 518 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 PLXNB2O15031 1838 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 ABCB11O95342 1321 aa17.14■□□□□ 0.33
NFIX-208ENST00000587260 CALML3P27482 149 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 STAT3P40763 770 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 GCLCP48506 637 aaPredicted RBP17.13■□□□□ 0.33
NFIX-208ENST00000587260 ERVK-9P63128 1117 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 ERVK-24P63145 666 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 PPP1R18Q6NYC8 613 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 REM2Q8IYK8 340 aaPredicted RBP17.13■□□□□ 0.33
NFIX-208ENST00000587260 DAGLBQ8NCG7 672 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 ZMYND12Q9H0C1 365 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
NFIX-208ENST00000587260 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 BAG4O95429 457 aaKnown RBP17.12■□□□□ 0.33
NFIX-208ENST00000587260 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 NLRP5P59047 1200 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 TRAF1Q13077 416 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 Q3C1V9 767 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 MCTP1Q6DN14 999 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 DIS3L2Q8IYB7 885 aaKnown RBP17.12■□□□□ 0.33
NFIX-208ENST00000587260 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 MOV10L1Q9BXT6 1211 aaKnown RBP17.12■□□□□ 0.33
NFIX-208ENST00000587260 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
NFIX-208ENST00000587260 SMCO2A6NFE2 343 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 NFIBO00712 420 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 CA12O43570 354 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 ECM2O94769 699 aaPredicted RBP17.11■□□□□ 0.33
NFIX-208ENST00000587260 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 TEX2Q8IWB9 1127 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 GPRC5AQ8NFJ5 357 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 TRERF1Q96PN7 1200 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 BTBD18B2RXH4 712 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 OPLAHO14841 1288 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 ADAMTS3O15072 1205 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 TLR2O60603 784 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 GNA11P29992 359 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 KRT2P35908 639 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 ADCY7P51828 1080 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 FAM110CQ1W6H9 321 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 ATL3Q6DD88 541 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 TNFRSF25Q93038 417 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 R3HDMLQ9H3Y0 253 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 MORF4L1Q9UBU8 362 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 PCDHA4Q9UN74 947 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
NFIX-208ENST00000587260 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
NFIX-208ENST00000587260 MGAMO43451 1857 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 LCTP09848 1927 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 M0R2N6 131 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 TRPA1O75762 1119 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 TBC1D8O95759 1140 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 ERCC3P19447 782 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 UBE2SQ16763 222 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 BLIDQ8IZY5 108 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 CLEC4DQ8WXI8 215 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 PORCNQ9H237 461 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 ACAD9Q9H845 621 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 C6orf50Q9HD87 102 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 PNMA2Q9UL42 364 aa17.1■□□□□ 0.33
NFIX-208ENST00000587260 CFBP00751 764 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms