RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 FXR1P51114 621 aaKnown RBP eCLIP20.69■□□□□ 0.9
TPM4-206ENST00000587201 BAATQ14032 418 aaPredicted RBP20.69■□□□□ 0.9
TPM4-206ENST00000587201 SKAP1Q86WV1 359 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 MAP4K1Q92918 833 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 GDF15Q99988 308 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 PHF24Q9UPV7 400 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 ATP11BQ9Y2G3 1177 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 WDR19Q8NEZ3 1342 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 SYNRGQ9UMZ2 1314 aa20.69■□□□□ 0.9
TPM4-206ENST00000587201 E7EWF7 191 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 DHX16O60231 1041 aaKnown RBP20.68■□□□□ 0.9
TPM4-206ENST00000587201 ADAMTS4O75173 837 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 SEC23AQ15436 765 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 USH1GQ495M9 461 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 ADGRF4Q8IZF3 695 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 NCOA7Q8NI08 942 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 PURBQ96QR8 312 aaKnown RBP20.68■□□□□ 0.9
TPM4-206ENST00000587201 KATNBL1Q9H079 304 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 SPC25Q9HBM1 224 aa20.68■□□□□ 0.9
TPM4-206ENST00000587201 RBM8AQ9Y5S9 174 aaKnown RBP20.68■□□□□ 0.9
TPM4-206ENST00000587201 ERICH2A1L162 156 aa20.67■□□□□ 0.9
TPM4-206ENST00000587201 IFIT3O14879 490 aaKnown RBP20.67■□□□□ 0.9
TPM4-206ENST00000587201 CALML3P27482 149 aa20.67■□□□□ 0.9
TPM4-206ENST00000587201 MAGEA10P43363 369 aaPredicted RBP20.67■□□□□ 0.9
TPM4-206ENST00000587201 CDC37Q16543 378 aaPredicted RBP20.67■□□□□ 0.9
TPM4-206ENST00000587201 RNF207Q6ZRF8 634 aa20.67■□□□□ 0.9
TPM4-206ENST00000587201 CLEC4DQ8WXI8 215 aa20.67■□□□□ 0.9
TPM4-206ENST00000587201 ADD3Q9UEY8 706 aaKnown RBP20.67■□□□□ 0.9
TPM4-206ENST00000587201 PRKAG2Q9UGJ0 569 aa20.67■□□□□ 0.9
TPM4-206ENST00000587201 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
TPM4-206ENST00000587201 DDX49Q9Y6V7 483 aaKnown RBP20.67■□□□□ 0.9
TPM4-206ENST00000587201 ASTN1O14525 1302 aa20.67■□□□□ 0.9
TPM4-206ENST00000587201 MCM3APO60318 1980 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 ADCY6O43306 1168 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 C6orf222P0C671 652 aaPredicted RBP20.66■□□□□ 0.9
TPM4-206ENST00000587201 BMP2KLQ5H9B9 411 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 STOX1Q6ZVD7 989 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 EEPD1Q7L9B9 569 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 KLHDC9Q8NEP7 349 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 ESYT1Q9BSJ8 1104 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 TSEN34Q9BSV6 310 aaKnown RBP20.66■□□□□ 0.9
TPM4-206ENST00000587201 VAT1LQ9HCJ6 419 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 PCDH10Q9P2E7 1040 aa20.66■□□□□ 0.9
TPM4-206ENST00000587201 TRIOBPQ9H2D6 2365 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 A0A1W2PPC1 479 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 A0A1W2PQ45 241 aaPredicted RBP20.65■□□□□ 0.9
TPM4-206ENST00000587201 A0A1W2PQY0 241 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 BMP8BP34820 402 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 ALDH5A1P51649 535 aaPredicted RBP20.65■□□□□ 0.9
TPM4-206ENST00000587201 TNFAIP2Q03169 654 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 SART3Q15020 963 aaKnown RBP20.65■□□□□ 0.9
TPM4-206ENST00000587201 TRIM60Q495X7 471 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 SLC30A10Q6XR72 485 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
TPM4-206ENST00000587201 CHST3Q7LGC8 479 aa20.65■□□□□ 0.9
TPM4-206ENST00000587201 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.64■□□□□ 0.89
TPM4-206ENST00000587201 MYADML2A6NDP7 307 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 MOXD2PA6NHM9 499 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 ACLYP53396 1101 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 GJA9P57773 515 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 RPS6P62753 249 aaKnown RBP20.64■□□□□ 0.89
TPM4-206ENST00000587201 MDM2Q00987 491 aaPredicted RBP20.64■□□□□ 0.89
TPM4-206ENST00000587201 WTAPQ15007 396 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 SNX17Q15036 470 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 KCNA10Q16322 511 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 FBXO16Q8IX29 292 aaPredicted RBP20.64■□□□□ 0.89
TPM4-206ENST00000587201 STAG2Q8N3U4 1231 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 NUP133Q8WUM0 1156 aa20.64■□□□□ 0.89
TPM4-206ENST00000587201 LSG1Q9H089 658 aaKnown RBP20.64■□□□□ 0.89
TPM4-206ENST00000587201 ABCB11O95342 1321 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 KLRF2D3W0D1 207 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 CST5P28325 142 aaPredicted RBP20.63■□□□□ 0.89
TPM4-206ENST00000587201 IRX5P78411 483 aaPredicted RBP20.63■□□□□ 0.89
TPM4-206ENST00000587201 QRICH1Q2TAL8 776 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 C1orf53Q5VUE5 145 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 CCSAPQ6IQ19 270 aaPredicted RBP20.63■□□□□ 0.89
TPM4-206ENST00000587201 FBXO11Q86XK2 927 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 PCSK9Q8NBP7 692 aaKnown RBP20.63■□□□□ 0.89
TPM4-206ENST00000587201 MORC4Q8TE76 937 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 UBE2OQ9C0C9 1292 aaKnown RBP20.63■□□□□ 0.89
TPM4-206ENST00000587201 UPF3AQ9H1J1 476 aaKnown RBP20.63■□□□□ 0.89
TPM4-206ENST00000587201 JMJD4Q9H9V9 463 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 VTA1Q9NP79 307 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 PRDM5Q9NQX1 630 aaPredicted RBP20.63■□□□□ 0.89
TPM4-206ENST00000587201 STARD7Q9NQZ5 370 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 PDGFCQ9NRA1 345 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 MAD2L2Q9UI95 211 aa20.63■□□□□ 0.89
TPM4-206ENST00000587201 LOC102724159A0A0B4J2E5 919 aa20.62■□□□□ 0.89
TPM4-206ENST00000587201 PWP2Q15269 919 aaKnown RBP20.62■□□□□ 0.89
TPM4-206ENST00000587201 TMEM67Q5HYA8 995 aa20.62■□□□□ 0.89
TPM4-206ENST00000587201 GNASQ5JWF2 1037 aa20.62■□□□□ 0.89
TPM4-206ENST00000587201 IQSEC1Q6DN90 963 aa20.62■□□□□ 0.89
TPM4-206ENST00000587201 TAPT1Q6NXT6 567 aa20.62■□□□□ 0.89
TPM4-206ENST00000587201 MB21D2Q8IYB1 491 aaPredicted RBP20.62■□□□□ 0.89
TPM4-206ENST00000587201 MPHOSPH6Q99547 160 aaKnown RBP20.62■□□□□ 0.89
TPM4-206ENST00000587201 LBHD1Q9BQE6 289 aaPredicted RBP20.62■□□□□ 0.89
TPM4-206ENST00000587201 SENP2Q9HC62 589 aa20.62■□□□□ 0.89
TPM4-206ENST00000587201 ANO2Q9NQ90 1003 aa20.62■□□□□ 0.89
TPM4-206ENST00000587201 LCTP09848 1927 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms