RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 FSCN1Q16658 493 aaKnown RBP16.84■□□□□ 0.29
CXXC1-208ENST00000587170 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 CXCL17Q6UXB2 119 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 ADAMTS19Q8TE59 1207 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 VTI1AQ96AJ9 217 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 VWCEQ96DN2 955 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 WNT8AQ9H1J5 351 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 YBX2Q9Y2T7 364 aaKnown RBP16.84■□□□□ 0.29
CXXC1-208ENST00000587170 UMODL1Q5DID0 1318 aa16.84■□□□□ 0.29
CXXC1-208ENST00000587170 RNF113AO15541 343 aaKnown RBP16.83■□□□□ 0.28
CXXC1-208ENST00000587170 PRDM1O75626 825 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 SIP14410 1827 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 SLC4A3P48751 1232 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 ITGA7Q13683 1181 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 LAMA4Q16363 1823 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 SLFN13Q68D06 897 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 FAM160B2Q86V87 743 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 STK11IPQ8N1F8 1099 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 BCL11AQ9H165 835 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 HOMER2Q9NSB8 354 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 RNF146Q9NTX7 359 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 Q9Y3F1 56 aa16.83■□□□□ 0.28
CXXC1-208ENST00000587170 SMARCA5O60264 1052 aaPredicted RBP16.82■□□□□ 0.28
CXXC1-208ENST00000587170 FGBP02675 491 aa16.82■□□□□ 0.28
CXXC1-208ENST00000587170 TDO2P48775 406 aa16.82■□□□□ 0.28
CXXC1-208ENST00000587170 ZNF444Q8N0Y2 327 aaPredicted RBP16.82■□□□□ 0.28
CXXC1-208ENST00000587170 MORC4Q8TE76 937 aa16.82■□□□□ 0.28
CXXC1-208ENST00000587170 NKX2-4Q9H2Z4 354 aa16.82■□□□□ 0.28
CXXC1-208ENST00000587170 SLC28A3Q9HAS3 691 aa16.82■□□□□ 0.28
CXXC1-208ENST00000587170 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 M0R2C6 588 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 B4GALT4O60513 344 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 SMPD1P17405 629 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 TAPT1Q6NXT6 567 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 CHURC1Q8WUH1 139 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 STAG1Q8WVM7 1258 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 AGBL1Q96MI9 1066 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 CYP39A1Q9NYL5 469 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
CXXC1-208ENST00000587170 PATL2C9JE40 543 aaKnown RBP16.8■□□□□ 0.28
CXXC1-208ENST00000587170 PFKMP08237 780 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 TSPY3P0CV98 308 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 TSPY8P0CW00 308 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 IQSEC1Q6DN90 963 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 OTOP2Q7RTS6 562 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 IFNL3Q8IZI9 196 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 PPM1EQ8WY54 764 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 UHRF1Q96T88 793 aaPredicted RBP16.8■□□□□ 0.28
CXXC1-208ENST00000587170 AP5M1Q9H0R1 490 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
CXXC1-208ENST00000587170 MYH7BA7E2Y1 1941 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 ZEB2O60315 1214 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 POU3F3P20264 500 aaPredicted RBP16.79■□□□□ 0.28
CXXC1-208ENST00000587170 PTGS1P23219 599 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 PDE4BQ07343 736 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
CXXC1-208ENST00000587170 PPP4R3BQ5MIZ7 849 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 GPATCH3Q96I76 525 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 TRERF1Q96PN7 1200 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 ALDH8A1Q9H2A2 487 aaPredicted RBP16.79■□□□□ 0.28
CXXC1-208ENST00000587170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.79■□□□□ 0.28
CXXC1-208ENST00000587170 SLC4A7Q9Y6M7 1214 aa16.79■□□□□ 0.28
CXXC1-208ENST00000587170 IGFBP4P22692 258 aa16.78■□□□□ 0.28
CXXC1-208ENST00000587170 SLC1A4P43007 532 aa16.78■□□□□ 0.28
CXXC1-208ENST00000587170 NOVP48745 357 aa16.78■□□□□ 0.28
CXXC1-208ENST00000587170 CCL23P55773 120 aa16.78■□□□□ 0.28
CXXC1-208ENST00000587170 CCDC85BQ15834 202 aaPredicted RBP16.78■□□□□ 0.28
CXXC1-208ENST00000587170 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
CXXC1-208ENST00000587170 PPP2R2DQ66LE6 453 aa16.78■□□□□ 0.28
CXXC1-208ENST00000587170 NOL8Q76FK4 1167 aaKnown RBP16.78■□□□□ 0.28
CXXC1-208ENST00000587170 FBXO16Q8IX29 292 aaPredicted RBP16.78■□□□□ 0.28
CXXC1-208ENST00000587170 RPUSD2Q8IZ73 545 aaKnown RBP16.78■□□□□ 0.28
CXXC1-208ENST00000587170 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
CXXC1-208ENST00000587170 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
CXXC1-208ENST00000587170 DYNC1LI2O43237 492 aaPredicted RBP16.77■□□□□ 0.28
CXXC1-208ENST00000587170 ALAS1P13196 640 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 PSMC6P62333 389 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 TFAP4Q01664 338 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 PPARAQ07869 468 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 DUSP28Q4G0W2 176 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 TMEM63BQ5T3F8 832 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 TSHZ3Q63HK5 1081 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 NACAP1Q9BZK3 213 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 PRR12Q9ULL5 1215 aa16.77■□□□□ 0.28
CXXC1-208ENST00000587170 MICAL3Q7RTP6 2002 aa16.77■□□□□ 0.27
CXXC1-208ENST00000587170 RBM47A0AV96 593 aaKnown RBP16.76■□□□□ 0.27
CXXC1-208ENST00000587170 FOXP2O15409 715 aa16.76■□□□□ 0.27
CXXC1-208ENST00000587170 APPP05067 770 aa16.76■□□□□ 0.27
CXXC1-208ENST00000587170 ICAM1P05362 532 aa16.76■□□□□ 0.27
CXXC1-208ENST00000587170 SLC3A2P08195 630 aaKnown RBP16.76■□□□□ 0.27
CXXC1-208ENST00000587170 BMP1P13497 986 aa16.76■□□□□ 0.27
CXXC1-208ENST00000587170 MCCP23508 829 aa16.76■□□□□ 0.27
CXXC1-208ENST00000587170 RABGGTBP53611 331 aa16.76■□□□□ 0.27
CXXC1-208ENST00000587170 LRRFIP1Q32MZ4 808 aaKnown RBP16.76■□□□□ 0.27
CXXC1-208ENST00000587170 RCSD1Q6JBY9 416 aa16.76■□□□□ 0.27
CXXC1-208ENST00000587170 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
CXXC1-208ENST00000587170 DCTPP1Q9H773 170 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms