RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 QRICH1Q2TAL8 776 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 USH1GQ495M9 461 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 MAMDC4Q6UXC1 1216 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 DHX32Q7L7V1 743 aaKnown RBP17.07■□□□□ 0.32
CCDC130-207ENST00000587098 ZNF467Q7Z7K2 595 aaPredicted RBP17.07■□□□□ 0.32
CCDC130-207ENST00000587098 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 MSL3Q8N5Y2 521 aaKnown RBP17.07■□□□□ 0.32
CCDC130-207ENST00000587098 MYL10Q9BUA6 226 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 DDX20Q9UHI6 824 aaKnown RBP17.07■□□□□ 0.32
CCDC130-207ENST00000587098 PFASO15067 1338 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 PDE4DIPQ5VU43 2346 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 CCDC69A6NI79 296 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 MNX1P50219 401 aaPredicted RBP17.06■□□□□ 0.32
CCDC130-207ENST00000587098 BAATQ14032 418 aaPredicted RBP17.06■□□□□ 0.32
CCDC130-207ENST00000587098 ANO1Q5XXA6 986 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 NFXL1Q6ZNB6 911 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 MTMR8Q96EF0 704 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 TCEANC2Q96MN5 208 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 PURBQ96QR8 312 aaKnown RBP17.06■□□□□ 0.32
CCDC130-207ENST00000587098 MAP3K14Q99558 947 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 RIOX1Q9H6W3 641 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 NRBP1Q9UHY1 535 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
CCDC130-207ENST00000587098 SYNGAP1Q96PV0 1343 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 SEPT4O43236 478 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 CYTH3O43739 400 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 MSCO60682 206 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 DDAH1O94760 285 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 ZNF865P0CJ78 1059 aaPredicted RBP17.05■□□□□ 0.32
CCDC130-207ENST00000587098 FBXO11Q86XK2 927 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 ANKLE1Q8NAG6 615 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 DIS3LQ8TF46 1054 aaKnown RBP17.05■□□□□ 0.32
CCDC130-207ENST00000587098 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
CCDC130-207ENST00000587098 USP26Q9BXU7 913 aa17.05■□□□□ 0.32
CCDC130-207ENST00000587098 MCM3APO60318 1980 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 ASTN1O14525 1302 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 EPB41L2O43491 1005 aaKnown RBP17.04■□□□□ 0.32
CCDC130-207ENST00000587098 CPA1P15085 419 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 RXRAP19793 462 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 ARMCX2Q7L311 632 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 SGMS1Q86VZ5 419 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 TBC1D5Q92609 795 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 PIGSQ96S52 555 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.04■□□□□ 0.32
CCDC130-207ENST00000587098 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
CCDC130-207ENST00000587098 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
CCDC130-207ENST00000587098 ABCB11O95342 1321 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 ZBTB5O15062 677 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 PPP1R11O60927 126 aaPredicted RBP17.03■□□□□ 0.32
CCDC130-207ENST00000587098 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
CCDC130-207ENST00000587098 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
CCDC130-207ENST00000587098 ACVR2BQ13705 512 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 RNF207Q6ZRF8 634 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 NECAB2Q7Z6G3 386 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 RGS22Q8NE09 1264 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
CCDC130-207ENST00000587098 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
CCDC130-207ENST00000587098 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
CCDC130-207ENST00000587098 MYH6P13533 1939 aa17.03■□□□□ 0.32
CCDC130-207ENST00000587098 ASB14A6NK59 587 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 CALML3P27482 149 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 KIF5BP33176 963 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 SLC30A10Q6XR72 485 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 KATNBL1Q9H079 304 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 ABHD16BQ9H3Z7 469 aa17.02■□□□□ 0.32
CCDC130-207ENST00000587098 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.32
CCDC130-207ENST00000587098 MRPL11Q9Y3B7 192 aaKnown RBP17.02■□□□□ 0.32
CCDC130-207ENST00000587098 PLEKHA8P1O95397 391 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 CALM1P0DP23 149 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 CALM2P0DP24 149 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 CALM3P0DP25 149 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 GNAQP50148 359 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 SRBD1Q8N5C6 995 aaKnown RBP17.01■□□□□ 0.31
CCDC130-207ENST00000587098 FANCBQ8NB91 859 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 BRPF3Q9ULD4 1205 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 FAM184BQ9ULE4 1060 aa17.01■□□□□ 0.31
CCDC130-207ENST00000587098 LCTP09848 1927 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 PNMA6FA0A0J9YX94 578 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 AKR1A1P14550 325 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 SMARCA1P28370 1054 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 ALDH5A1P51649 535 aaPredicted RBP17■□□□□ 0.31
CCDC130-207ENST00000587098 APOA5Q6Q788 366 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
CCDC130-207ENST00000587098 MORC4Q8TE76 937 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 LZTS2Q9BRK4 669 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 C11orf49Q9H6J7 331 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 ADD3Q9UEY8 706 aaKnown RBP17■□□□□ 0.31
CCDC130-207ENST00000587098 PCDHA1Q9Y5I3 950 aa17■□□□□ 0.31
CCDC130-207ENST00000587098 OPLAHO14841 1288 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms