RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 TLK2Q86UE8 772 aa17.84■□□□□ 0.45
SF3A2-202ENST00000586396 MICALL1Q8N3F8 863 aa17.84■□□□□ 0.45
SF3A2-202ENST00000586396 KATNBL1Q9H079 304 aa17.84■□□□□ 0.45
SF3A2-202ENST00000586396 EPB41L4AQ9HCS5 686 aaPredicted RBP17.84■□□□□ 0.45
SF3A2-202ENST00000586396 YBX2Q9Y2T7 364 aaKnown RBP17.84■□□□□ 0.45
SF3A2-202ENST00000586396 PLIN4Q96Q06 1357 aa17.83■□□□□ 0.45
SF3A2-202ENST00000586396 LCTP09848 1927 aa17.83■□□□□ 0.44
SF3A2-202ENST00000586396 CCL23P55773 120 aa17.83■□□□□ 0.44
SF3A2-202ENST00000586396 CNTN2Q02246 1040 aa17.83■□□□□ 0.44
SF3A2-202ENST00000586396 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.44
SF3A2-202ENST00000586396 LRRC47Q8N1G4 583 aaKnown RBP17.83■□□□□ 0.44
SF3A2-202ENST00000586396 ACAD9Q9H845 621 aa17.83■□□□□ 0.44
SF3A2-202ENST00000586396 SYNPO2Q9UMS6 1093 aa17.83■□□□□ 0.44
SF3A2-202ENST00000586396 ASTN1O14525 1302 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 CABYRO75952 493 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 PLA2G5P39877 138 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 PDE1AP54750 535 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 NKX3-2P78367 333 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 ITGA7Q13683 1181 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 FSCN1Q16658 493 aaKnown RBP17.82■□□□□ 0.44
SF3A2-202ENST00000586396 SLC43A3Q8NBI5 491 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 CEP95Q96GE4 821 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 OSBPL3Q9H4L5 887 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 ZNF287Q9HBT7 754 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 TANC1Q9C0D5 1861 aa17.82■□□□□ 0.44
SF3A2-202ENST00000586396 IGKV6D-41A0A0C4DH26 115 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 ZBBXA8MT70 800 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 M0R2C6 588 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 PRDM1O75626 825 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 TTLL1O95922 423 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 TDO2P48775 406 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 STAT2P52630 851 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 IKQ13123 557 aaPredicted RBP17.81■□□□□ 0.44
SF3A2-202ENST00000586396 FAM133AQ8N9E0 248 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 GMCL1P1Q8NEA9 526 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 NOC4LQ9BVI4 516 aaKnown RBP17.81■□□□□ 0.44
SF3A2-202ENST00000586396 AP5M1Q9H0R1 490 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 A1CFQ9NQ94 594 aaKnown RBP17.81■□□□□ 0.44
SF3A2-202ENST00000586396 RNF146Q9NTX7 359 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 SLC4A7Q9Y6M7 1214 aa17.81■□□□□ 0.44
SF3A2-202ENST00000586396 ASB14A6NK59 587 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 PATL2C9JE40 543 aaKnown RBP17.8■□□□□ 0.44
SF3A2-202ENST00000586396 FOXP2O15409 715 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 ZEB2O60315 1214 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 B4GALT4O60513 344 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 BMP3P12645 472 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 RABGGTBP53611 331 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 ZNF444Q8N0Y2 327 aaPredicted RBP17.8■□□□□ 0.44
SF3A2-202ENST00000586396 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 FAM122AQ96E09 287 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 TRPV6Q9H1D0 765 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 WNT8AQ9H1J5 351 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 MTMR4Q9NYA4 1195 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
SF3A2-202ENST00000586396 SCN5AQ14524 2016 aa17.8■□□□□ 0.44
SF3A2-202ENST00000586396 ZMYM6O95789 1325 aa17.79■□□□□ 0.44
SF3A2-202ENST00000586396 FDX1P10109 184 aa17.79■□□□□ 0.44
SF3A2-202ENST00000586396 SKIV2LQ15477 1246 aaKnown RBP17.79■□□□□ 0.44
SF3A2-202ENST00000586396 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
SF3A2-202ENST00000586396 IFNL3Q8IZI9 196 aa17.79■□□□□ 0.44
SF3A2-202ENST00000586396 MKL1Q969V6 931 aa17.79■□□□□ 0.44
SF3A2-202ENST00000586396 NECAB3Q96P71 396 aaPredicted RBP17.79■□□□□ 0.44
SF3A2-202ENST00000586396 SEZ6LQ9BYH1 1024 aa17.79■□□□□ 0.44
SF3A2-202ENST00000586396 PCDHA11Q9Y5I1 949 aa17.79■□□□□ 0.44
SF3A2-202ENST00000586396 PRRC2BQ5JSZ5 2229 aaKnown RBP17.79■□□□□ 0.44
SF3A2-202ENST00000586396 COL4A4P53420 1690 aaPredicted RBP17.78■□□□□ 0.44
SF3A2-202ENST00000586396 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 MYOGP15173 224 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 ATP2A2P16615 1042 aaKnown RBP17.78■□□□□ 0.44
SF3A2-202ENST00000586396 PTGS1P23219 599 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 PSMC6P62333 389 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 TFF2Q03403 129 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 AAK1Q2M2I8 961 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 SLFN13Q68D06 897 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 FBXO16Q8IX29 292 aaPredicted RBP17.78■□□□□ 0.44
SF3A2-202ENST00000586396 RPUSD2Q8IZ73 545 aaKnown RBP17.78■□□□□ 0.44
SF3A2-202ENST00000586396 SCLYQ96I15 445 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 FSD1Q9BTV5 496 aa17.78■□□□□ 0.44
SF3A2-202ENST00000586396 GRIN2DO15399 1336 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 SOWAHBA6NEL2 793 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 DYNC1LI2O43237 492 aaPredicted RBP17.77■□□□□ 0.44
SF3A2-202ENST00000586396 APPP05067 770 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 ALAS1P13196 640 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 SMPD1P17405 629 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 FAM160B2Q86V87 743 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 AGBL1Q96MI9 1066 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
SF3A2-202ENST00000586396 TRERF1Q96PN7 1200 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 C1QTNF1Q9BXJ1 281 aa17.77■□□□□ 0.44
SF3A2-202ENST00000586396 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
SF3A2-202ENST00000586396 DDX49Q9Y6V7 483 aaKnown RBP17.77■□□□□ 0.44
SF3A2-202ENST00000586396 ZNF536O15090 1300 aa17.76■□□□□ 0.43
SF3A2-202ENST00000586396 PFKMP08237 780 aa17.76■□□□□ 0.43
SF3A2-202ENST00000586396 SLC1A4P43007 532 aa17.76■□□□□ 0.43
SF3A2-202ENST00000586396 NUCB1Q02818 461 aa17.76■□□□□ 0.43
SF3A2-202ENST00000586396 ALX1Q15699 326 aa17.76■□□□□ 0.43
SF3A2-202ENST00000586396 TKFCQ3LXA3 575 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms