RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ASPRV1Q53RT3 343 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 SYNE3Q6ZMZ3 975 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 ANKRD35Q8N283 1001 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 IGDCC4Q8TDY8 1250 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 PRR12Q9ULL5 1215 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 SH2B2O14492 632 aaPredicted RBP26.91■■□□□ 1.9
LSM7-202ENST00000585395 ADCK5Q3MIX3 580 aa26.91■■□□□ 1.9
LSM7-202ENST00000585395 CHST13Q8NET6 341 aa26.91■■□□□ 1.9
LSM7-202ENST00000585395 MAML3Q96JK9 1138 aa26.91■■□□□ 1.9
LSM7-202ENST00000585395 TM6SF1Q9BZW5 370 aa26.91■■□□□ 1.9
LSM7-202ENST00000585395 RIPK3Q9Y572 518 aa26.91■■□□□ 1.9
LSM7-202ENST00000585395 PARP1P09874 1014 aaKnown RBP26.9■■□□□ 1.9
LSM7-202ENST00000585395 SNHG28P0DPA3 235 aa26.9■■□□□ 1.9
LSM7-202ENST00000585395 SNAP25P60880 206 aa26.9■■□□□ 1.9
LSM7-202ENST00000585395 ZNF543Q08ER8 600 aa26.9■■□□□ 1.9
LSM7-202ENST00000585395 SYDE2Q5VT97 1194 aa26.9■■□□□ 1.9
LSM7-202ENST00000585395 GUCD1Q96NT3 240 aa26.9■■□□□ 1.9
LSM7-202ENST00000585395 DNAH12Q6ZR08 3092 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 CALM1P0DP23 149 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 CALM2P0DP24 149 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 CALM3P0DP25 149 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 ALAS1P13196 640 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 CASTP20810 708 aaKnown RBP26.89■■□□□ 1.9
LSM7-202ENST00000585395 SLC16A2P36021 539 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 TTBK2Q6IQ55 1244 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 ACAD9Q9H845 621 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 LY9Q9HBG7 655 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 PNMA2Q9UL42 364 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 CYP46A1Q9Y6A2 500 aa26.89■■□□□ 1.9
LSM7-202ENST00000585395 VCANP13611 3396 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 MSCO60682 206 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 DDAH1O94760 285 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 MDM2Q00987 491 aaPredicted RBP26.88■■□□□ 1.89
LSM7-202ENST00000585395 EXOSC10Q01780 885 aaKnown RBP26.88■■□□□ 1.89
LSM7-202ENST00000585395 TKFCQ3LXA3 575 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 AGBL1Q96MI9 1066 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 RNF146Q9NTX7 359 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 CCPG1Q9ULG6 757 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 SLC12A7Q9Y666 1083 aa26.88■■□□□ 1.89
LSM7-202ENST00000585395 RPS6KB1P23443 525 aa26.87■■□□□ 1.89
LSM7-202ENST00000585395 KIF5BP33176 963 aa26.87■■□□□ 1.89
LSM7-202ENST00000585395 LRRC26Q2I0M4 334 aa26.87■■□□□ 1.89
LSM7-202ENST00000585395 BTNL9Q6UXG8 535 aa26.87■■□□□ 1.89
LSM7-202ENST00000585395 CTCFLQ8NI51 663 aaPredicted RBP26.87■■□□□ 1.89
LSM7-202ENST00000585395 MAP3K14Q99558 947 aa26.87■■□□□ 1.89
LSM7-202ENST00000585395 DDX20Q9UHI6 824 aaKnown RBP26.87■■□□□ 1.89
LSM7-202ENST00000585395 DIS3Q9Y2L1 958 aaKnown RBP26.87■■□□□ 1.89
LSM7-202ENST00000585395 RUFY3Q7L099 469 aa26.86■■□□□ 1.89
LSM7-202ENST00000585395 SGMS1Q86VZ5 419 aa26.86■■□□□ 1.89
LSM7-202ENST00000585395 ZNF654Q8IZM8 581 aa26.86■■□□□ 1.89
LSM7-202ENST00000585395 TRERF1Q96PN7 1200 aa26.86■■□□□ 1.89
LSM7-202ENST00000585395 CYBAP13498 195 aa26.85■■□□□ 1.89
LSM7-202ENST00000585395 ZNF792Q3KQV3 632 aa26.85■■□□□ 1.89
LSM7-202ENST00000585395 LHX8Q68G74 356 aa26.85■■□□□ 1.89
LSM7-202ENST00000585395 TINF2Q9BSI4 451 aa26.85■■□□□ 1.89
LSM7-202ENST00000585395 ZSWIM6Q9HCJ5 1215 aa26.85■■□□□ 1.89
LSM7-202ENST00000585395 CNPY2Q9Y2B0 182 aa26.85■■□□□ 1.89
LSM7-202ENST00000585395 FRMPD3Q5JV73 1810 aa26.85■■□□□ 1.89
LSM7-202ENST00000585395 DHX16O60231 1041 aaKnown RBP26.84■■□□□ 1.89
LSM7-202ENST00000585395 SEC24BO95487 1268 aa26.84■■□□□ 1.89
LSM7-202ENST00000585395 GOLGA8HP0CJ92 632 aa26.84■■□□□ 1.89
LSM7-202ENST00000585395 GNAQP50148 359 aa26.84■■□□□ 1.89
LSM7-202ENST00000585395 GRM4Q14833 912 aa26.84■■□□□ 1.89
LSM7-202ENST00000585395 NUP133Q8WUM0 1156 aa26.84■■□□□ 1.89
LSM7-202ENST00000585395 LBHD1Q9BQE6 289 aaPredicted RBP26.84■■□□□ 1.89
LSM7-202ENST00000585395 LRRC2Q9BYS8 371 aa26.84■■□□□ 1.89
LSM7-202ENST00000585395 RANBP17Q9H2T7 1088 aaKnown RBP26.84■■□□□ 1.89
LSM7-202ENST00000585395 ZNF536O15090 1300 aa26.84■■□□□ 1.89
LSM7-202ENST00000585395 MYCNP04198 464 aaPredicted RBP26.83■■□□□ 1.89
LSM7-202ENST00000585395 ICAM1P05362 532 aa26.83■■□□□ 1.89
LSM7-202ENST00000585395 PRAMEF19Q5SWL8 479 aa26.83■■□□□ 1.89
LSM7-202ENST00000585395 FBXL16Q8N461 479 aa26.83■■□□□ 1.89
LSM7-202ENST00000585395 EYSQ5T1H1 3165 aa26.83■■□□□ 1.88
LSM7-202ENST00000585395 TROAPQ12815 778 aa26.82■■□□□ 1.88
LSM7-202ENST00000585395 ZNF697Q5TEC3 545 aa26.82■■□□□ 1.88
LSM7-202ENST00000585395 Q6ZUG5 572 aa26.82■■□□□ 1.88
LSM7-202ENST00000585395 TRPV1Q8NER1 839 aa26.82■■□□□ 1.88
LSM7-202ENST00000585395 LZTS2Q9BRK4 669 aa26.82■■□□□ 1.88
LSM7-202ENST00000585395 SEPT4O43236 478 aa26.81■■□□□ 1.88
LSM7-202ENST00000585395 RCAN1P53805 252 aa26.81■■□□□ 1.88
LSM7-202ENST00000585395 ANO1Q5XXA6 986 aa26.81■■□□□ 1.88
LSM7-202ENST00000585395 NSMFQ6X4W1 530 aa26.81■■□□□ 1.88
LSM7-202ENST00000585395 TCEANC2Q96MN5 208 aa26.81■■□□□ 1.88
LSM7-202ENST00000585395 FAM161BQ96MY7 647 aa26.81■■□□□ 1.88
LSM7-202ENST00000585395 SENP2Q9HC62 589 aa26.81■■□□□ 1.88
LSM7-202ENST00000585395 PALM3A6NDB9 673 aaPredicted RBP26.8■■□□□ 1.88
LSM7-202ENST00000585395 KLRF2D3W0D1 207 aa26.8■■□□□ 1.88
LSM7-202ENST00000585395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.8■■□□□ 1.88
LSM7-202ENST00000585395 MSL3Q8N5Y2 521 aaKnown RBP26.8■■□□□ 1.88
LSM7-202ENST00000585395 IL17RAQ96F46 866 aa26.8■■□□□ 1.88
LSM7-202ENST00000585395 C22orf23Q9BZE7 217 aa26.8■■□□□ 1.88
LSM7-202ENST00000585395 UBA5Q9GZZ9 404 aa26.8■■□□□ 1.88
LSM7-202ENST00000585395 GPHNQ9NQX3 736 aaPredicted RBP26.8■■□□□ 1.88
LSM7-202ENST00000585395 NRBP1Q9UHY1 535 aa26.8■■□□□ 1.88
LSM7-202ENST00000585395 ZHX1Q9UKY1 873 aaPredicted RBP26.8■■□□□ 1.88
LSM7-202ENST00000585395 SPTBN5Q9NRC6 3674 aaKnown RBP26.8■■□□□ 1.88
LSM7-202ENST00000585395 ZBTB43O43298 467 aa26.79■■□□□ 1.88
LSM7-202ENST00000585395 CPA1P15085 419 aa26.79■■□□□ 1.88
LSM7-202ENST00000585395 TRAF1Q13077 416 aa26.79■■□□□ 1.88
LSM7-202ENST00000585395 PPP2R5BQ15173 497 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms