RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 MTMR7Q9Y216 660 aa20.93■□□□□ 0.94
ERBB2-221ENST00000584888 SYNRGQ9UMZ2 1314 aa20.93■□□□□ 0.94
ERBB2-221ENST00000584888 TRIM43BA6NCK2 446 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 DUSP11O75319 330 aaKnown RBP20.92■□□□□ 0.94
ERBB2-221ENST00000584888 ACLYP53396 1101 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 SNAP25P60880 206 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 CNTN2Q02246 1040 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 SEC23AQ15436 765 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 CCDC96Q2M329 555 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 TKFCQ3LXA3 575 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 CCDC144BQ3MJ40 725 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 ARMCX2Q7L311 632 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 FAM133AQ8N9E0 248 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 TRIM43Q96BQ3 446 aaPredicted RBP20.92■□□□□ 0.94
ERBB2-221ENST00000584888 TRERF1Q96PN7 1200 aa20.92■□□□□ 0.94
ERBB2-221ENST00000584888 RANBP17Q9H2T7 1088 aaKnown RBP20.92■□□□□ 0.94
ERBB2-221ENST00000584888 A1CFQ9NQ94 594 aaKnown RBP20.92■□□□□ 0.94
ERBB2-221ENST00000584888 POTEB2H3BUK9 544 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 ALAS1P13196 640 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 SLC16A2P36021 539 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 KCNA10Q16322 511 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 SYDE2Q5VT97 1194 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 CCSAPQ6IQ19 270 aaPredicted RBP20.91■□□□□ 0.94
ERBB2-221ENST00000584888 CCDC174Q6PII3 467 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 STOX1Q6ZVD7 989 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 CCDC144CPQ8IYA2 1237 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 PNMA1Q8ND90 353 aa20.91■□□□□ 0.94
ERBB2-221ENST00000584888 RBM8AQ9Y5S9 174 aaKnown RBP20.91■□□□□ 0.94
ERBB2-221ENST00000584888 TNKSO95271 1327 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 FRMPD2Q68DX3 1309 aaPredicted RBP20.9■□□□□ 0.94
ERBB2-221ENST00000584888 MYADML2A6NDP7 307 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 E7EWF7 191 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 ADCY6O43306 1168 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 SHHQ15465 462 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 NUP133Q8WUM0 1156 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 KATNBL1Q9H079 304 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 GPCPD1Q9NPB8 672 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 STARD7Q9NQZ5 370 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 MTMR10Q9NXD2 777 aa20.9■□□□□ 0.94
ERBB2-221ENST00000584888 SOWAHBA6NEL2 793 aa20.89■□□□□ 0.93
ERBB2-221ENST00000584888 MOXD2PA6NHM9 499 aa20.89■□□□□ 0.93
ERBB2-221ENST00000584888 PQBP1O60828 265 aaKnown RBP20.89■□□□□ 0.93
ERBB2-221ENST00000584888 CLTBP09497 229 aa20.89■□□□□ 0.93
ERBB2-221ENST00000584888 IRX5P78411 483 aaPredicted RBP20.89■□□□□ 0.93
ERBB2-221ENST00000584888 GPATCH4Q5T3I0 446 aaKnown RBP20.89■□□□□ 0.93
ERBB2-221ENST00000584888 LTBP2Q14767 1821 aa20.89■□□□□ 0.93
ERBB2-221ENST00000584888 MCM3APO60318 1980 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 ICAM1P05362 532 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 C6orf222P0C671 652 aaPredicted RBP20.88■□□□□ 0.93
ERBB2-221ENST00000584888 ITGB8P26012 769 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 CST5P28325 142 aaPredicted RBP20.88■□□□□ 0.93
ERBB2-221ENST00000584888 MUM1L1Q5H9M0 696 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 C9orf50Q5SZB4 431 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 UPF3AQ9H1J1 476 aaKnown RBP20.88■□□□□ 0.93
ERBB2-221ENST00000584888 KAT14Q9H8E8 782 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 SPC25Q9HBM1 224 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 CCPG1Q9ULG6 757 aa20.88■□□□□ 0.93
ERBB2-221ENST00000584888 ASB14A6NK59 587 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 KIAA0355O15063 1070 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 NEFLP07196 543 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 GJA9P57773 515 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 TRDNQ13061 729 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 NECTIN1Q15223 517 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 KIAA1211Q6ZU35 1233 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 ANKRD33Q7Z3H0 272 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 PCSK9Q8NBP7 692 aaKnown RBP20.87■□□□□ 0.93
ERBB2-221ENST00000584888 TOX2Q96NM4 488 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 UBAC1Q9BSL1 405 aa20.87■□□□□ 0.93
ERBB2-221ENST00000584888 LCTP09848 1927 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 FAAP100Q0VG06 881 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 GNASQ5JWF2 1037 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 ERICH6BQ5W0A0 696 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 FAM109BQ6ICB4 259 aaPredicted RBP20.86■□□□□ 0.93
ERBB2-221ENST00000584888 MB21D2Q8IYB1 491 aaPredicted RBP20.86■□□□□ 0.93
ERBB2-221ENST00000584888 NCOA7Q8NI08 942 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 GLT1D1Q96MS3 346 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 CYP39A1Q9NYL5 469 aa20.86■□□□□ 0.93
ERBB2-221ENST00000584888 ASTN1O14525 1302 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 ELP1O95163 1332 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 DCDC2CA8MYV0 355 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 ASGR1P07306 291 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 GOLGA8HP0CJ92 632 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 RAG1P15918 1043 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 ANTXR2P58335 489 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 TNFAIP2Q03169 654 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 ASPRV1Q53RT3 343 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 IFIT1BQ5T764 474 aaKnown RBP20.85■□□□□ 0.93
ERBB2-221ENST00000584888 NSMFQ6X4W1 530 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 SLC17A8Q8NDX2 589 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 STXBP5LQ9Y2K9 1186 aa20.85■□□□□ 0.93
ERBB2-221ENST00000584888 DDX49Q9Y6V7 483 aaKnown RBP20.85■□□□□ 0.93
ERBB2-221ENST00000584888 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.84■□□□□ 0.93
ERBB2-221ENST00000584888 SLC27A2O14975 620 aa20.84■□□□□ 0.93
ERBB2-221ENST00000584888 CTAGE5O15320 804 aa20.84■□□□□ 0.93
ERBB2-221ENST00000584888 NKX3-2P78367 333 aa20.84■□□□□ 0.93
ERBB2-221ENST00000584888 NOL8Q76FK4 1167 aaKnown RBP20.84■□□□□ 0.93
ERBB2-221ENST00000584888 IGDCC4Q8TDY8 1250 aa20.84■□□□□ 0.93
ERBB2-221ENST00000584888 VTI1AQ96AJ9 217 aa20.84■□□□□ 0.93
ERBB2-221ENST00000584888 UBA5Q9GZZ9 404 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms