RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 SMPD1P17405 629 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 POU3F3P20264 500 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 ADD2P35612 726 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 GRB10Q13322 594 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 ZKSCAN2Q63HK3 967 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 CTR9Q6PD62 1173 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 UIMC1Q96RL1 719 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 ALDH8A1Q9H2A2 487 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 FBXO40Q9UH90 709 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 MYH7P12883 1935 aa16.96■□□□□ 0.3
CSNK1D-224ENST00000584672 ATP2A1O14983 1001 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 NKX3-2P78367 333 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 FBXO16Q8IX29 292 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 CHST13Q8NET6 341 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 PTPRSQ13332 1948 aa16.95■□□□□ 0.3
CSNK1D-224ENST00000584672 ZEB2O60315 1214 aa16.94■□□□□ 0.3
CSNK1D-224ENST00000584672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.94■□□□□ 0.3
CSNK1D-224ENST00000584672 LRRC47Q8N1G4 583 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-224ENST00000584672 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
CSNK1D-224ENST00000584672 RHPN1Q8TCX5 695 aa16.94■□□□□ 0.3
CSNK1D-224ENST00000584672 GDPD5Q8WTR4 605 aa16.94■□□□□ 0.3
CSNK1D-224ENST00000584672 TNKSO95271 1327 aa16.94■□□□□ 0.3
CSNK1D-224ENST00000584672 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 PI4K2BG5E9Z4 385 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 RBAK-RBAKDNI3L0D1 243 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 ACTN1P12814 892 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 RASA1P20936 1047 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 FAM47CQ5HY64 1035 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 HERC6Q8IVU3 1022 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 SLC9A7Q96T83 725 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 FTOQ9C0B1 505 aaKnown RBP eCLIP16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 ACAD9Q9H845 621 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 A1CFQ9NQ94 594 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 PAG1Q9NWQ8 432 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 NYAP2Q9P242 653 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 COG6Q9Y2V7 657 aa16.93■□□□□ 0.3
CSNK1D-224ENST00000584672 LPXNO60711 386 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 PFKMP08237 780 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 MYL3P08590 195 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 RLBP1P12271 317 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 MRE11P49959 708 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 TMCO2Q7Z6W1 182 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 TET1Q8NFU7 2136 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 MKNK2Q9HBH9 465 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 MTUS1Q9ULD2 1270 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 ZBED9Q6R2W3 1325 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 LCTP09848 1927 aa16.92■□□□□ 0.3
CSNK1D-224ENST00000584672 LCHNA4D1U4 455 aa16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 ASB14A6NK59 587 aa16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 MINDY4BA8MYZ0 360 aa16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 IFIT2P09913 472 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 SNAP25P60880 206 aa16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 TAPT1Q6NXT6 567 aa16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 FEM1BQ9UK73 627 aa16.91■□□□□ 0.3
CSNK1D-224ENST00000584672 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 PRDM1O75626 825 aa16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 ALAS1P13196 640 aa16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 SSTR3P32745 418 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 PUS7LQ9H0K6 701 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 ARPP21Q9UBL0 812 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-224ENST00000584672 PRR33A8MZF0 331 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 TMEM232C9JQI7 657 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 SUPT20HL2P0C7V6 817 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 OAZ1P54368 228 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 GJD3Q8N144 294 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 CEP95Q96GE4 821 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 SEZ6LQ9BYH1 1024 aa16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 UBE2ZQ9H832 354 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-224ENST00000584672 BMP3P12645 472 aa16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 CHMP4BP1P59074 171 aa16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 PURAQ00577 322 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 MUM1L1Q5H9M0 696 aa16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 SLFN13Q68D06 897 aa16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 IQSEC1Q6DN90 963 aa16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 PHOSPHO2Q8TCD6 241 aa16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 ZNF536O15090 1300 aa16.88■□□□□ 0.29
CSNK1D-224ENST00000584672 IGKV6D-41A0A0C4DH26 115 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 IQCF3P0C7M6 154 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 IL9P15248 144 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 KCNA5P22460 613 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 KCNJ6P48051 423 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 NBPF20Q3BBV1 942 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 HSP90AB4PQ58FF6 505 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms