RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.49□□□□□ -1.37
RTTN-209ENST00000583043 NSRP1Q9H0G5 558 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 GOLPH3LQ9H4A5 285 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 SEC31BQ9NQW1 1179 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 MTRF1LQ9UGC7 380 aaKnown RBP6.49□□□□□ -1.37
RTTN-209ENST00000583043 GUCA1BQ9UMX6 200 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 HPS5Q9UPZ3 1129 aa6.49□□□□□ -1.37
RTTN-209ENST00000583043 LGALS16A8MUM7 142 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 PRDM1O75626 825 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 USP11P51784 963 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 ZRSR2Q15696 482 aaKnown RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 GUF1Q8N442 669 aaKnown RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 FAM71BQ8TC56 605 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 NSUN4Q96CB9 384 aaKnown RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 FAM84BQ96KN1 310 aaPredicted RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 CTDNEP1O95476 244 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 EXOC8Q8IYI6 725 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 SDR42E1Q8WUS8 393 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 CARD6Q9BX69 1037 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 TFCP2L1Q9NZI6 479 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 TCERG1LQ5VWI1 586 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 B4GALNT4Q76KP1 1039 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 USP40Q9NVE5 1235 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 STK32BQ9NY57 414 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 SEL1LQ9UBV2 794 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 ZNF215Q9UL58 517 aaPredicted RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 PCDHA12Q9UN75 941 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 ACTN4O43707 911 aaKnown RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 LRP10Q7Z4F1 713 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 MAPKAPK5Q8IW41 473 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 TUBGCP2Q9BSJ2 902 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 VPS16Q9H269 839 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 IL25Q9H293 177 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 LZTFL1Q9NQ48 299 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 TAB2Q9NYJ8 693 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 A0A1W2PQJ5 194 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 GOLGA8KD6RF30 607 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 PPEF1O14829 653 aaPredicted RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 SERPINB2P05120 415 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 FERP16591 822 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 TXKP42681 527 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 SMC1AQ14683 1233 aaKnown RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 TCP11X2Q5H9J9 407 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 SHC4Q6S5L8 630 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 MAATS1Q7Z4T9 603 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 ZNF622Q969S3 477 aaKnown RBP eCLIP6.48□□□□□ -1.37
RTTN-209ENST00000583043 TIPINQ9BVW5 301 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 IFIH1Q9BYX4 1025 aaKnown RBP6.48□□□□□ -1.37
RTTN-209ENST00000583043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.48□□□□□ -1.37
RTTN-209ENST00000583043 JRKLQ9Y4A0 524 aa6.48□□□□□ -1.37
RTTN-209ENST00000583043 ADAMTSL3P82987 1691 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 PTPAQ15257 358 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 AOC3Q16853 763 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 FIGNQ5HY92 759 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 TMEM179Q6ZVK1 233 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 FAM76AQ8TAV0 307 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 KCND2Q9NZV8 630 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 PI4KBQ9UBF8 816 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 PCDHB6Q9Y5E3 794 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 DLG5Q8TDM6 1919 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 SNRPFP62306 86 aaKnown RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 CDK17Q00537 523 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 INF2Q27J81 1249 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 UBL4BQ8N7F7 174 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 CLIC6Q96NY7 704 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 AS3MTQ9HBK9 375 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 BCL9LQ86UU0 1499 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 CDC27P30260 824 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 MAN1A1P33908 653 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 NOP2P46087 812 aaKnown RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 LRMPQ12912 555 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 ELF2Q15723 593 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 HERC4Q5GLZ8 1057 aaPredicted RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 HHIPL2Q6UWX4 724 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 NLRX1Q86UT6 975 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 FBXO11Q86XK2 927 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 C7orf25Q9BPX7 421 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 PLCB1Q9NQ66 1216 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 ARMCX3Q9UH62 379 aaPredicted RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 DDX25Q9UHL0 483 aaKnown RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 KDM3BQ7LBC6 1761 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 TARSL2A2RTX5 802 aaKnown RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 CDK8P49336 464 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 IFFO1Q0D2I5 559 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 PICALMQ13492 652 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 C8orf74Q6P047 294 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 TRIM11Q96F44 468 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 IMPG2Q9BZV3 1241 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 UBE4BO95155 1302 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 ANKRD62A6NC57 917 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 RHOBTB3O94955 611 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 XRCC5P13010 732 aaKnown RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 GBP2P32456 591 aaPredicted RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 SNX16P57768 344 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 FAM47AQ5JRC9 791 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 SYN2Q92777 582 aaPredicted RBP6.47□□□□□ -1.37
RTTN-209ENST00000583043 RAB17Q9H0T7 212 aa6.47□□□□□ -1.37
RTTN-209ENST00000583043 L2HGDHQ9H9P8 463 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms